STRINGSTRING
Glov_0797 Glov_0797 argD argD Glov_0359 Glov_0359 Glov_0368 Glov_0368 Glov_0455 Glov_0455 Glov_0460 Glov_0460 Glov_0480 Glov_0480 Glov_0786 Glov_0786 hisC hisC Glov_0835 Glov_0835 Glov_0913 Glov_0913 Glov_0959 Glov_0959 Glov_1075 Glov_1075 Glov_1114 Glov_1114 Glov_1160 Glov_1160 trpB-2 trpB-2 Glov_1540 Glov_1540 Glov_1607 Glov_1607 Glov_1628 Glov_1628 Glov_1635 Glov_1635 bioF bioF Glov_1768 Glov_1768 Glov_1856 Glov_1856 glyA glyA acpP acpP Glov_2133 Glov_2133 dxs dxs Glov_2185 Glov_2185 Glov_2195 Glov_2195 Glov_2203 Glov_2203 dxs-2 dxs-2 bioA bioA Glov_2280 Glov_2280 Glov_2308 Glov_2308 Glov_2390 Glov_2390 hisC-2 hisC-2 Glov_2503 Glov_2503 Glov_2508 Glov_2508 Glov_2600 Glov_2600 Glov_2762 Glov_2762 Glov_2977 Glov_2977 Glov_2989 Glov_2989 Glov_2992 Glov_2992 Glov_3033 Glov_3033 dapL dapL Glov_3057 Glov_3057 Glov_3070 Glov_3070 Glov_3071 Glov_3071 Glov_3090 Glov_3090 hemL hemL argD-2 argD-2 Glov_3249 Glov_3249 Glov_3260 Glov_3260 Glov_3322 Glov_3322 Glov_3359 Glov_3359 Glov_3401 Glov_3401 Glov_3557 Glov_3557
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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from curated databases
experimentally determined
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gene neighborhood
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gene co-occurrence
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Glov_0797PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mag:amb0791 Fe-S oxidoreductase. (489 aa)
argDKEGG: dar:Daro_1679 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (397 aa)
Glov_0359KEGG: gsu:GSU2425 O-acetyl-L-homoserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein. (427 aa)
Glov_0368PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: gsu:GSU0097 pyruvate ferredoxin/flavodoxin oxidoreductase. (1193 aa)
Glov_0455Aminotransferase class I and II; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: gur:Gura_3621 hypothetical protein. (387 aa)
Glov_0460Alanine racemase domain protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. (228 aa)
Glov_0480TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; KEGG: gsu:GSU0486 threonine dehydratase. (406 aa)
Glov_0786PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: pne:Pnec_0337 thiamine pyrophosphate protein TPP binding domain protein; Belongs to the TPP enzyme family. (598 aa)
hisCTIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: ppd:Ppro_3041 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (350 aa)
Glov_0835PFAM: aminotransferase class V; KEGG: gsu:GSU2786 cysteine desulfurase. (377 aa)
Glov_0913PFAM: MOSC domain containing protein; KEGG: ppd:Ppro_0303 MOSC domain containing protein. (143 aa)
Glov_0959PFAM: Pyridoxal-dependent decarboxylase; KEGG: gme:Gmet_1644 pyridoxal-dependent decarboxylase. (538 aa)
Glov_1075PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: cau:Caur_0250 thiamine pyrophosphate protein domain protein TPP-binding. (346 aa)
Glov_1114PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: mka:MK0531 acetolactate synthase large subunit; Belongs to the TPP enzyme family. (562 aa)
Glov_1160PFAM: MOSC domain containing protein; KEGG: ppd:Ppro_0303 MOSC domain containing protein. (262 aa)
trpB-2Pyridoxal-phosphate dependent TrpB-like enzyme; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (451 aa)
Glov_15408-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: bpt:Bpet2310 hypothetical protein. (445 aa)
Glov_1607Cysteine desulfurase NifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. (388 aa)
Glov_1628PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: gme:Gmet_1363 2-oxoglutarate ferredoxin oxidoreductase subunit beta. (272 aa)
Glov_16352-oxoglutarate dehydrogenase, E1 subunit; KEGG: gsu:GSU2449 alpha-ketoglutarate decarboxylase; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase E1 component; Transketolase central region. (901 aa)
bioF8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. (391 aa)
Glov_1768PFAM: aminotransferase class I and II; KEGG: gsu:GSU1242 aspartate aminotransferase. (399 aa)
Glov_1856Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (591 aa)
glyAGlycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (415 aa)
acpPAcyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. (77 aa)
Glov_2133Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1169 aa)
dxsDeoxyxylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. (625 aa)
Glov_2185PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gme:Gmet_1705 cobalamin B12-binding/radical SAM. (473 aa)
Glov_2195PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gsu:GSU0238 radical SAM domain protein. (460 aa)
Glov_2203PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gsu:GSU0247 radical SAM domain protein. (475 aa)
dxs-2Deoxyxylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. (622 aa)
bioAAdenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. (455 aa)
Glov_2280KEGG: ppd:Ppro_2395 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit. (460 aa)
Glov_2308PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: gur:Gura_2238 thiamine pyrophosphate enzyme domain protein TPP-binding. (247 aa)
Glov_2390PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: mar:MAE_36750 pyruvate decarboxylase isozyme 1. (550 aa)
hisC-2TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class V; aminotransferase class I and II; KEGG: swo:Swol_1811 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (389 aa)
Glov_2503TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: gur:Gura_3720 acetolactate synthase, large subunit, biosynthetic type. (566 aa)
Glov_2508Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (822 aa)
Glov_2600PFAM: aminotransferase class I and II; KEGG: ppd:Ppro_1046 aspartate aminotransferase. (397 aa)
Glov_2762Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (380 aa)
Glov_2977PFAM: aminotransferase class I and II; KEGG: ppd:Ppro_1998 aminotransferase, class I and II. (385 aa)
Glov_2989PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gme:Gmet_0245 radical SAM. (500 aa)
Glov_2992PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gme:Gmet_0101 radical SAM. (622 aa)
Glov_3033PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gme:Gmet_0219 diaminopimelate decarboxylase. (439 aa)
dapLAminotransferase class I and II; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. (410 aa)
Glov_3057PFAM: Radical SAM domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Elongator protein 3/MiaB/NifB; Tetratricopeptide domain protein; KEGG: ppd:Ppro_2638 magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase. (518 aa)
Glov_3070Cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: gme:Gmet_0698 cysteine synthase / cystathionine gamma-synthase. (378 aa)
Glov_3071Cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ppd:Ppro_1831 cystathionine gamma-synthase. (377 aa)
Glov_3090KEGG: ppd:Ppro_2825 radical SAM domain protein; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnJ; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. (476 aa)
hemLTIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: gme:Gmet_3356 glutamate-1-semialdehyde 2,1-aminomutase. (428 aa)
argD-2TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: gsu:GSU0151 acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (399 aa)
Glov_3249PFAM: aminotransferase class I and II; KEGG: ppd:Ppro_0622 aminotransferase. (434 aa)
Glov_3260KEGG: pla:Plav_1702 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein. (713 aa)
Glov_3322KEGG: ppd:Ppro_3415 alpha-glucan phosphorylases; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35. (854 aa)
Glov_3359PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pca:Pcar_1134 putative Fe-S oxidoreductase. (539 aa)
Glov_3401PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dol:Dole_2407 radical SAM domain protein. (484 aa)
Glov_3557PFAM: periplasmic binding protein; KEGG: dau:Daud_1317 periplasmic binding protein. (276 aa)
Your Current Organism:
Geobacter lovleyi
NCBI taxonomy Id: 398767
Other names: G. lovleyi SZ, Geobacter lovleyi SZ, Geobacter lovleyi str. SZ, Geobacter lovleyi strain SZ
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