STRINGSTRING
Glov_0739 Glov_0739 Glov_0740 Glov_0740 Glov_2003 Glov_2003 Glov_2022 Glov_2022 Glov_2389 Glov_2389 Glov_2634 Glov_2634 Glov_2771 Glov_2771 Glov_2944 Glov_2944 Glov_2957 Glov_2957 Glov_3623 Glov_3623 Glov_3526 Glov_3526 Glov_0560 Glov_0560 Glov_0599 Glov_0599 Glov_0714 Glov_0714
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Glov_0739KEGG: plt:Plut_1037 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SMART: extracellular solute-binding protein family 3. (515 aa)
Glov_0740KEGG: cph:Cpha266_1178 ABC-type amino acid transport/signal transduction systems periplasmic component/domain-like. (261 aa)
Glov_2003Multi-sensor signal transduction histidine kinase; KEGG: asa:ASA_2109 two-component system hybrid sensor histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: extracellular solute-binding protein family 3; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (1109 aa)
Glov_2022KEGG: pth:PTH_2331 ABC-type amino acid transport/signal transduction system; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor. (748 aa)
Glov_2389PFAM: extracellular solute-binding protein family 3; KEGG: aha:AHA_2800 amino acid ABC transporter, periplasmic amino acid-binding protein. (260 aa)
Glov_2634KEGG: rfr:Rfer_3626 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; hemerythrin-like metal-binding protein; PFAM: GGDEF domain containing protein; Hemerythrin HHE cation binding domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; extracellular solute-binding protein family 3. (768 aa)
Glov_2771KEGG: rfr:Rfer_3893 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; extracellular solute-binding protein family 3. (860 aa)
Glov_2944KEGG: gsu:GSU1295 hypothetical protein. (246 aa)
Glov_2957PAS/PAC sensor hybrid histidine kinase; KEGG: dps:DP0883 similar to two-component system sensory/regulatory protein (hybrid family); TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; extracellular solute-binding protein family 3. (810 aa)
Glov_3623Integral membrane sensor signal transduction histidine kinase; PFAM: extracellular solute-binding protein family 3; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gsu:GSU2755 periplasmic substrate-binding protein/sensor histidine kinase. (620 aa)
Glov_3526Integral membrane sensor signal transduction histidine kinase; PFAM: extracellular solute-binding protein family 3; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gsu:GSU2755 periplasmic substrate-binding protein/sensor histidine kinase. (584 aa)
Glov_0560KEGG: ppd:Ppro_2061 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: extracellular solute-binding protein family 3; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (940 aa)
Glov_0599PAS/PAC sensor hybrid histidine kinase; KEGG: dar:Daro_3872 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; extracellular solute-binding protein family 3. (957 aa)
Glov_0714TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; extracellular solute-binding protein family 3; KEGG: pth:PTH_2331 ABC-type amino acid transport/signal transduction system. (755 aa)
Your Current Organism:
Geobacter lovleyi
NCBI taxonomy Id: 398767
Other names: G. lovleyi SZ, Geobacter lovleyi SZ, Geobacter lovleyi str. SZ, Geobacter lovleyi strain SZ
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