STRINGSTRING
Glov_3345 Glov_3345 argD argD Glov_0359 Glov_0359 Glov_0455 Glov_0455 Glov_0766 Glov_0766 Glov_0784 Glov_0784 Glov_0790 Glov_0790 Glov_0798 Glov_0798 hisC hisC Glov_0835 Glov_0835 selA selA Glov_0959 Glov_0959 Glov_1489 Glov_1489 Glov_1506 Glov_1506 Glov_1540 Glov_1540 Glov_1607 Glov_1607 bioF bioF Glov_1768 Glov_1768 glyA glyA bioA bioA Glov_2316 Glov_2316 hisC-2 hisC-2 Glov_2600 Glov_2600 Glov_2671 Glov_2671 gcvPA gcvPA Glov_2977 Glov_2977 dapL dapL Glov_3070 Glov_3070 Glov_3071 Glov_3071 hemL hemL argD-2 argD-2 Glov_3249 Glov_3249 Glov_3272 Glov_3272 Glov_3333 Glov_3333 Glov_3378 Glov_3378 Glov_3402 Glov_3402 cobQ cobQ
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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from curated databases
experimentally determined
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gene neighborhood
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gene co-occurrence
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Your Input:
Glov_3345Alanine--glyoxylate transaminase; PFAM: aminotransferase class V; KEGG: gme:Gmet_3173 aminotransferase, class V. (355 aa)
argDKEGG: dar:Daro_1679 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (397 aa)
Glov_0359KEGG: gsu:GSU2425 O-acetyl-L-homoserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein. (427 aa)
Glov_0455Aminotransferase class I and II; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: gur:Gura_3621 hypothetical protein. (387 aa)
Glov_0766DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gsu:GSU2262 pleiotropic regulatory protein; Belongs to the DegT/DnrJ/EryC1 family. (364 aa)
Glov_0784PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: gur:Gura_3788 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (446 aa)
Glov_0790Glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gme:Gmet_1325 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (368 aa)
Glov_0798DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pol:Bpro_4011 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (423 aa)
hisCTIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: ppd:Ppro_3041 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (350 aa)
Glov_0835PFAM: aminotransferase class V; KEGG: gsu:GSU2786 cysteine desulfurase. (377 aa)
selAL-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. (468 aa)
Glov_0959PFAM: Pyridoxal-dependent decarboxylase; KEGG: gme:Gmet_1644 pyridoxal-dependent decarboxylase. (538 aa)
Glov_1489DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mpt:Mpe_A0607 lipopolysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family. (383 aa)
Glov_1506DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class-III; KEGG: ajs:Ajs_3018 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (535 aa)
Glov_15408-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: bpt:Bpet2310 hypothetical protein. (445 aa)
Glov_1607Cysteine desulfurase NifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. (388 aa)
bioF8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. (391 aa)
Glov_1768PFAM: aminotransferase class I and II; KEGG: gsu:GSU1242 aspartate aminotransferase. (399 aa)
glyAGlycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (415 aa)
bioAAdenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. (455 aa)
Glov_2316TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; KEGG: ppd:Ppro_2495 cysteine desulfurase family protein. (383 aa)
hisC-2TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class V; aminotransferase class I and II; KEGG: swo:Swol_1811 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (389 aa)
Glov_2600PFAM: aminotransferase class I and II; KEGG: ppd:Ppro_1046 aspartate aminotransferase. (397 aa)
Glov_2671Glycine dehydrogenase (decarboxylating); PFAM: glycine cleavage system P-protein; KEGG: gme:Gmet_3152 glycine dehydrogenase subunit 2. (481 aa)
gcvPAGlycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. (448 aa)
Glov_2977PFAM: aminotransferase class I and II; KEGG: ppd:Ppro_1998 aminotransferase, class I and II. (385 aa)
dapLAminotransferase class I and II; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. (410 aa)
Glov_3070Cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: gme:Gmet_0698 cysteine synthase / cystathionine gamma-synthase. (378 aa)
Glov_3071Cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ppd:Ppro_1831 cystathionine gamma-synthase. (377 aa)
hemLTIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: gme:Gmet_3356 glutamate-1-semialdehyde 2,1-aminomutase. (428 aa)
argD-2TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: gsu:GSU0151 acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (399 aa)
Glov_3249PFAM: aminotransferase class I and II; KEGG: ppd:Ppro_0622 aminotransferase. (434 aa)
Glov_3272PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: gme:Gmet_0886 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (387 aa)
Glov_3333Threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. (347 aa)
Glov_3378PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sat:SYN_00827 perosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. (368 aa)
Glov_3402PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ccr:CC_1012 perosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. (507 aa)
cobQCobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (863 aa)
Your Current Organism:
Geobacter lovleyi
NCBI taxonomy Id: 398767
Other names: G. lovleyi SZ, Geobacter lovleyi SZ, Geobacter lovleyi str. SZ, Geobacter lovleyi strain SZ
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