STRINGSTRING
Glov_2023 Glov_2023 Glov_1062 Glov_1062 Glov_2393 Glov_2393 Glov_1550 Glov_1550 Glov_1722 Glov_1722 Glov_0533 Glov_0533 Glov_1726 Glov_1726 Glov_0600 Glov_0600 Glov_0709 Glov_0709 Glov_1892 Glov_1892 Glov_1893 Glov_1893
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Glov_2023Protein serine/threonine phosphatase; PFAM: histidine kinase HAMP region domain protein; Cache domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: ppd:Ppro_1527 serine phosphatase. (648 aa)
Glov_1062Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: pca:Pcar_2558 signal transduction protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (1027 aa)
Glov_2393Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bra:BRADO4689 putative sensor histidine kinase with a response regulator receiver domain. (735 aa)
Glov_1550KEGG: ppd:Ppro_2061 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein. (995 aa)
Glov_1722KEGG: ppd:Ppro_2061 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (1007 aa)
Glov_0533Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ppd:Ppro_1972 signal transduction histidine kinase. (660 aa)
Glov_1726KEGG: ppd:Ppro_2061 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein. (881 aa)
Glov_0600KEGG: rfr:Rfer_3606 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GAF domain protein. (669 aa)
Glov_0709Protein serine/threonine phosphatase; PFAM: histidine kinase HAMP region domain protein; Cache domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mbn:Mboo_0643 stage II sporulation E family protein. (716 aa)
Glov_1892Diguanylate cyclase with PAS/PAC sensor; KEGG: gme:Gmet_3477 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (771 aa)
Glov_1893KEGG: gme:Gmet_3478 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (879 aa)
Your Current Organism:
Geobacter lovleyi
NCBI taxonomy Id: 398767
Other names: G. lovleyi SZ, Geobacter lovleyi SZ, Geobacter lovleyi str. SZ, Geobacter lovleyi strain SZ
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