STRINGSTRING
Glov_0069 Glov_0069 Glov_0095 Glov_0095 Glov_0153 Glov_0153 Glov_0171 Glov_0171 Glov_0189 Glov_0189 Glov_0252 Glov_0252 Glov_0342 Glov_0342 Glov_0475 Glov_0475 Glov_0495 Glov_0495 Glov_0505 Glov_0505 Glov_0530 Glov_0530 Glov_0597 Glov_0597 Glov_0618 Glov_0618 Glov_0774 Glov_0774 Glov_0879 Glov_0879 Glov_0894 Glov_0894 Glov_0937 Glov_0937 Glov_0994 Glov_0994 Glov_1053 Glov_1053 Glov_1106 Glov_1106 Glov_1125 Glov_1125 msrA msrA Glov_1260 Glov_1260 tuf tuf secE secE rpoB rpoB rpoC rpoC Glov_1344 Glov_1344 secY secY rpoA rpoA Glov_1453 Glov_1453 Glov_1455 Glov_1455 Glov_1456 Glov_1456 Glov_1458 Glov_1458 Glov_1481 Glov_1481 Glov_1518 Glov_1518 Glov_1594 Glov_1594 Glov_1610 Glov_1610 Glov_1619 Glov_1619 Glov_1631 Glov_1631 Glov_1696 Glov_1696 Glov_1749 Glov_1749 katG katG Glov_1825 Glov_1825 Glov_1854 Glov_1854 msrA-2 msrA-2 secF secF secD secD Glov_2032 Glov_2032 Glov_2033 Glov_2033 Glov_2097 Glov_2097 Glov_2216 Glov_2216 Glov_2222 Glov_2222 Glov_2276 Glov_2276 rpoZ rpoZ Glov_2362 Glov_2362 Glov_2391 Glov_2391 Glov_2394 Glov_2394 Glov_2412 Glov_2412 secA secA Glov_2506 Glov_2506 Glov_2635 Glov_2635 Glov_2772 Glov_2772 tpx tpx Glov_3067 Glov_3067 Glov_3123 Glov_3123 Glov_3183 Glov_3183 Glov_3237 Glov_3237 Glov_3350 Glov_3350 Glov_3410 Glov_3410 Glov_3451 Glov_3451 Glov_3495 Glov_3495 Glov_3542 Glov_3542 Glov_3546 Glov_3546 ndk ndk Glov_3626 Glov_3626 Glov_3627 Glov_3627
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
Glov_0069PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: rso:RS05067 probable transmembrane protein. (406 aa)
Glov_0095PFAM: major facilitator superfamily MFS_1; KEGG: gme:Gmet_0806 major facilitator superfamily MFS_1. (395 aa)
Glov_0153PFAM: major facilitator superfamily MFS_1; KEGG: scl:sce8951 permease of the major facilitator superfamily. (419 aa)
Glov_0171PFAM: beta-lactamase domain protein; KEGG: ade:Adeh_1068 beta-lactamase-like; Belongs to the UPF0173 family. (266 aa)
Glov_0189Thioredoxin domain; Contains selenocysteine; PFAM: Thioredoxin domain; KEGG: gur:Gura_0335 thioredoxin domain protein. (147 aa)
Glov_0252PFAM: glutaredoxin 2; KEGG: ppd:Ppro_0197 glutaredoxin 2. (278 aa)
Glov_0342KEGG: gsu:GSU2640 hypothetical protein. (224 aa)
Glov_0475PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: gsu:GSU3246 thioredoxin peroxidase. (198 aa)
Glov_0495PFAM: Mammalian cell entry related domain protein; KEGG: ppd:Ppro_3214 mammalian cell entry related domain protein. (360 aa)
Glov_0505TIGRFAM: thioredoxin; PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: ppd:Ppro_3380 thioredoxin; Belongs to the thioredoxin family. (109 aa)
Glov_0530PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mpt:Mpe_A1221 peroxiredoxin-like protein. (168 aa)
Glov_0597PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: wsu:WS0760 putative arsenate reductase. (142 aa)
Glov_0618TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ppd:Ppro_3157 phosphate binding protein. (321 aa)
Glov_0774PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: ppd:Ppro_3025 ABC transporter related. (589 aa)
Glov_0879PFAM: major facilitator superfamily MFS_1; KEGG: sse:Ssed_0296 arabinose efflux permease-like protein. (395 aa)
Glov_0894PFAM: major facilitator superfamily MFS_1; KEGG: gsu:GSU0773 multidrug resistance protein, putative. (403 aa)
Glov_0937PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: aav:Aave_0149 major facilitator superfamily MFS_1. (448 aa)
Glov_0994KEGG: ppd:Ppro_2961 hypothetical protein. (185 aa)
Glov_1053PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pca:Pcar_2330 bacterioferritin comigratory protein. (157 aa)
Glov_1106PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: ppd:Ppro_3365 2-acyl-glycerophospho-ethanolamine acyltransferase. (1114 aa)
Glov_1125Hypothetical protein. (749 aa)
msrAPeptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (155 aa)
Glov_1260PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: ppd:Ppro_0646 tetratricopeptide TPR_2 repeat protein. (616 aa)
tufTranslation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (396 aa)
secEPreprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (60 aa)
rpoBDNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1497 aa)
rpoCDNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1385 aa)
Glov_1344KEGG: ppd:Ppro_0678 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein. (396 aa)
secYPreprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (437 aa)
rpoADNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (340 aa)
Glov_1453KEGG: gsu:GSU0968 hypothetical protein. (331 aa)
Glov_1455TIGRFAM: M6 family metalloprotease domain protein; KEGG: bce:BC2422 secreted metalloprotease. (998 aa)
Glov_1456KEGG: cms:CMS2179 hypothetical protein. (792 aa)
Glov_1458TIGRFAM: M6 family metalloprotease domain protein; KEGG: mar:MAE_49800 predicted secreted metalloprotease. (1004 aa)
Glov_1481PFAM: peptidylprolyl isomerase FKBP-type; KEGG: mxa:MXAN_7110 peptidyl-prolyl cis-trans isomerase, FKBP-type. (220 aa)
Glov_1518KEGG: gur:Gura_3822 hypothetical protein. (240 aa)
Glov_1594KEGG: gsu:GSU2023 hypothetical protein. (120 aa)
Glov_1610Catalytic domain of components of various dehydrogenase complexes; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (418 aa)
Glov_1619Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (112 aa)
Glov_1631TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ppd:Ppro_2635 drug resistance transporter, EmrB/QacA subfamily. (521 aa)
Glov_1696Peroxiredoxin; Contains selenocysteine; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: amt:Amet_1461 alkyl hydroperoxide reductase. (234 aa)
Glov_1749Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (367 aa)
katGCatalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (735 aa)
Glov_1825PFAM: major facilitator superfamily MFS_1; KEGG: ppd:Ppro_1443 major facilitator superfamily MFS_1. (407 aa)
Glov_1854PFAM: Mammalian cell entry related domain protein; KEGG: gur:Gura_1894 mammalian cell entry related domain protein. (318 aa)
msrA-2Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (204 aa)
secFProtein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (313 aa)
secDProtein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (530 aa)
Glov_2032PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppd:Ppro_2013 binding-protein-dependent transport systems inner membrane component. (285 aa)
Glov_2033PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppd:Ppro_2014 binding-protein-dependent transport systems inner membrane component. (324 aa)
Glov_20974-phytase; PFAM: extracellular solute-binding protein family 5; KEGG: ppd:Ppro_2655 extracellular solute-binding protein, family 5. (546 aa)
Glov_2216PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gsu:GSU2002 hypothetical protein. (368 aa)
Glov_2222Ferritin Dps family protein; Iron-storage protein. (176 aa)
Glov_2276Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: ppd:Ppro_2006 redoxin domain protein. (171 aa)
rpoZDNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (68 aa)
Glov_2362PFAM: peptidylprolyl isomerase FKBP-type; KEGG: gvi:glr0841 FKBP-type peptidyl-prolyl cis-trans isomerase. (143 aa)
Glov_2391TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mbn:Mboo_1880 drug resistance transporter, EmrB/QacA subfamily. (480 aa)
Glov_2394Porin precursor-like protein; KEGG: dps:DP0627 similar to porin precursor. (444 aa)
Glov_2412PFAM: major facilitator superfamily MFS_1; KEGG: ppd:Ppro_1511 major facilitator superfamily MFS_1. (384 aa)
secAPreprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. (899 aa)
Glov_2506KEGG: gur:Gura_0475 ABC-type phosphate transport system periplasmic component-like protein. (253 aa)
Glov_2635Hypothetical protein; KEGG: dps:DP0627 similar to porin precursor. (441 aa)
Glov_2772KEGG: gur:Gura_2952 hypothetical protein. (257 aa)
tpxRedoxin domain protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. (171 aa)
Glov_3067PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: ppd:Ppro_2613 ABC transporter, transmembrane region. (621 aa)
Glov_3123PFAM: Roadblock/LC7 family protein; KEGG: gur:Gura_4331 roadblock/LC7 family protein. (162 aa)
Glov_3183PFAM: Mammalian cell entry related domain protein; KEGG: ppd:Ppro_0560 mammalian cell entry related domain protein. (150 aa)
Glov_3237PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: gur:Gura_1640 major facilitator superfamily MFS_1. (418 aa)
Glov_3350KEGG: gur:Gura_4032 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (318 aa)
Glov_3410PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: ppd:Ppro_0447 ABC transporter related. (588 aa)
Glov_3451KEGG: gur:Gura_0052 extracellular solute-binding protein, family 1. (245 aa)
Glov_3495PFAM: Roadblock/LC7 family protein; KEGG: ppd:Ppro_3318 hypothetical protein. (118 aa)
Glov_3542PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: scl:sce4660 permease of the major facilitator superfamily. (405 aa)
Glov_3546KEGG: gur:Gura_0475 ABC-type phosphate transport system periplasmic component-like protein. (326 aa)
ndkNucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. (138 aa)
Glov_3626PFAM: major facilitator superfamily MFS_1; KEGG: sse:Ssed_0296 arabinose efflux permease-like protein. (414 aa)
Glov_3627PFAM: outer membrane porin; KEGG: ccv:CCV52592_2207 metalloid reductase RarA. (435 aa)
Your Current Organism:
Geobacter lovleyi
NCBI taxonomy Id: 398767
Other names: G. lovleyi SZ, Geobacter lovleyi SZ, Geobacter lovleyi str. SZ, Geobacter lovleyi strain SZ
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