STRINGSTRING
RCOM_1587550 RCOM_1587550 RCOM_1510580 RCOM_1510580 RCOM_1688060 RCOM_1688060 RCOM_1688570 RCOM_1688570 RCOM_1622190 RCOM_1622190 RCOM_1609330 RCOM_1609330 RCOM_1428040 RCOM_1428040 RCOM_1437260 RCOM_1437260 TPS4 TPS4 RCOM_1582530 RCOM_1582530 RCOM_1047680 RCOM_1047680 RCOM_1078490 RCOM_1078490 RCOM_1544790 RCOM_1544790 RCOM_0799630 RCOM_0799630 RCOM_0679170 RCOM_0679170 RCOM_0968760 RCOM_0968760 TPS7 TPS7 TPS13 TPS13 RCOM_1307010 RCOM_1307010 RCOM_0937370 RCOM_0937370 RCOM_0938180 RCOM_0938180 RCOM_0938310 RCOM_0938310 RCOM_1298210 RCOM_1298210 RCOM_1352230 RCOM_1352230 RCOM_1536990 RCOM_1536990 RCOM_0991210 RCOM_0991210 RCOM_0873970 RCOM_0873970 RCOM_0523370 RCOM_0523370 TPS1 TPS1 RCOM_0784670 RCOM_0784670 TPS3 TPS3 RCOM_1408430 RCOM_1408430 RCOM_1282010 RCOM_1282010 RCOM_0422660 RCOM_0422660 RCOM_1520400 RCOM_1520400 RCOM_1156000 RCOM_1156000 RCOM_0553150 RCOM_0553150 RCOM_1122510 RCOM_1122510 RCOM_0612090 RCOM_0612090 RCOM_0612630 RCOM_0612630 RCOM_0878400 RCOM_0878400 RCOM_0793270 RCOM_0793270 RCOM_0857100 RCOM_0857100 RCOM_1373490 RCOM_1373490 RCOM_0747390 RCOM_0747390 RCOM_0154370 RCOM_0154370 RCOM_0013160 RCOM_0013160 RCOM_1107490 RCOM_1107490 RCOM_0274860 RCOM_0274860 RCOM_0275080 RCOM_0275080 RCOM_0275090 RCOM_0275090 RCOM_0410350 RCOM_0410350 RCOM_0082580 RCOM_0082580 RCOM_0286430 RCOM_0286430 RCOM_0176040 RCOM_0176040 RCOM_0349570 RCOM_0349570 RCOM_0426460 RCOM_0426460 TPS12 TPS12 RCOM_2093030 RCOM_2093030 RCOM_2045220 RCOM_2045220 RCOM_2020190 RCOM_2020190
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RCOM_1587550Sigma factor sigb regulation protein rsbq, putative. (266 aa)
RCOM_15105801-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast, putative. (467 aa)
RCOM_1688060Beta-carotene hydroxylase, putative; Belongs to the sterol desaturase family. (300 aa)
RCOM_16885702-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase. (230 aa)
RCOM_1622190AA_kinase domain-containing protein. (337 aa)
RCOM_16093309-cis-epoxycarotenoid dioxygenase, putative. (642 aa)
RCOM_1428040Zeta-carotene desaturase, chloroplast, putative; Belongs to the 'GDSL' lipolytic enzyme family. (964 aa)
RCOM_1437260Cytochrome P450, putative; Belongs to the cytochrome P450 family. (632 aa)
TPS4Probable terpene synthase 4; Probable sesquiterpene synthase; Belongs to the terpene synthase family. (563 aa)
RCOM_1582530Beta-carotene hydroxylase, putative; Belongs to the sterol desaturase family. (303 aa)
RCOM_1047680Lycopene epsilon cyclase, chloroplast, putative. (508 aa)
RCOM_1078490Isopentenyl-diphosphate delta isomerase, putative. (314 aa)
RCOM_1544790(R)-limonene synthase, putative. (596 aa)
RCOM_0799630Retinal pigment epithelium, putative. (515 aa)
RCOM_06791701-deoxyxylulose-5-phosphate synthase, putative. (720 aa)
RCOM_09687609-cis-epoxycarotenoid dioxygenase, putative. (536 aa)
TPS7Alpha-farnesene synthase; Catalyzes the cyclization of farnesyl diphosphate to (E,E)- alpha-farnesene; Belongs to the terpene synthase family. (564 aa)
TPS13Probable terpene synthase 13; Probable sesquiterpene synthase; Belongs to the terpene synthase family. (572 aa)
RCOM_1307010Amine oxidase, putative. (597 aa)
RCOM_0937370Uncharacterized protein. (243 aa)
RCOM_0938180ATP binding protein, putative. (290 aa)
RCOM_09383104-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative. (466 aa)
RCOM_12982102-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplast, putative. (285 aa)
RCOM_1352230Cytochrome P450, putative; Belongs to the cytochrome P450 family. (552 aa)
RCOM_1536990NnrU domain-containing protein. (384 aa)
RCOM_0991210DUF4033 domain-containing protein. (244 aa)
RCOM_0873970Alkyl transferase; Belongs to the UPP synthase family. (381 aa)
RCOM_0523370Farnesyl-pyrophosphate synthetase, putative; Belongs to the FPP/GGPP synthase family. (352 aa)
TPS1Alpha-copaene synthase; Catalyzes the cyclization of farnesyl diphosphate to alpha- copaene and (+)-delta cadinene. (558 aa)
RCOM_07846704-diphosphocytidyl-2-C-methyl-d-erythritol kinase, putative. (388 aa)
TPS3Probable terpene synthase 3; Probable sesquiterpene synthase; Belongs to the terpene synthase family. (547 aa)
RCOM_1408430Zeaxanthin epoxidase, chloroplastic; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin. (665 aa)
RCOM_1282010Capsanthin/capsorubin synthase, chloroplast, putative. (495 aa)
RCOM_0422660Carotenoid isomerase, chloroplast, putative. (617 aa)
RCOM_1520400ATP binding protein, putative; Belongs to the IPP transferase family. (446 aa)
RCOM_1156000Sigma factor sigb regulation protein rsbq, putative. (269 aa)
RCOM_0553150Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family. (369 aa)
RCOM_1122510VDE domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (484 aa)
RCOM_0612090Alkyl transferase; Belongs to the UPP synthase family. (310 aa)
RCOM_0612630Uncharacterized protein. (91 aa)
RCOM_0878400Phytoene synthase, chloroplast, putative. (385 aa)
RCOM_0793270tRNA delta(2)-isopentenylpyrophosphate transferase, putative; Belongs to the IPP transferase family. (453 aa)
RCOM_0857100Protease ecfE, putative. (447 aa)
RCOM_1373490Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family. (345 aa)
RCOM_0747390Geranylgeranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family. (417 aa)
RCOM_01543704-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative. (716 aa)
RCOM_0013160Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family. (372 aa)
RCOM_1107490Lycopene beta cyclase, chloroplast, putative. (514 aa)
RCOM_0274860Alkyl transferase; Belongs to the UPP synthase family. (331 aa)
RCOM_0275080Alkyl transferase; Belongs to the UPP synthase family. (370 aa)
RCOM_0275090Alkyl transferase; Belongs to the UPP synthase family. (363 aa)
RCOM_04103501-deoxyxylulose-5-phosphate synthase, putative. (714 aa)
RCOM_0082580Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family. (308 aa)
RCOM_0286430Phytoene synthase, chloroplast, putative. (428 aa)
RCOM_0176040ATP binding protein, putative. (328 aa)
RCOM_0349570ATP binding protein, putative. (983 aa)
RCOM_0426460Farnesyl-pyrophosphate synthetase, putative; Belongs to the FPP/GGPP synthase family. (333 aa)
TPS12Probable terpene synthase 12; Probable sesquiterpene synthase; Belongs to the terpene synthase family. (587 aa)
RCOM_20930309-cis-epoxycarotenoid dioxygenase, putative. (170 aa)
RCOM_2045220Uncharacterized protein. (206 aa)
RCOM_20201902-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, putative. (211 aa)
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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