STRINGSTRING
RCOM_1595530 RCOM_1595530 RCOM_1509430 RCOM_1509430 RCOM_1435740 RCOM_1435740 RCOM_1563770 RCOM_1563770 RCOM_1369180 RCOM_1369180 RCOM_0803100 RCOM_0803100 RCOM_0867610 RCOM_0867610 RCOM_0993500 RCOM_0993500 RCOM_0536690 RCOM_0536690 RCOM_0726280 RCOM_0726280 RCOM_0024490 RCOM_0024490 RCOM_0838580 RCOM_0838580 RCOM_0001270 RCOM_0001270
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RCOM_1595530AP-4 complex subunit mu-1, putative; Belongs to the adaptor complexes medium subunit family. (472 aa)
RCOM_1509430Clathrin coat assembly protein ap-1, putative; Belongs to the adaptor complexes medium subunit family. (428 aa)
RCOM_1435740Clathrin coat adaptor ap3 medium chain, putative; Belongs to the adaptor complexes medium subunit family. (415 aa)
RCOM_1563770AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (161 aa)
RCOM_1369180AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (153 aa)
RCOM_0803100Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. (848 aa)
RCOM_0867610AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family. (981 aa)
RCOM_0993500AP-1 complex subunit gamma. (875 aa)
RCOM_0536690AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (166 aa)
RCOM_0726280Uncharacterized protein. (848 aa)
RCOM_0024490Clathrin coat assembly protein ap-1, putative; Belongs to the adaptor complexes medium subunit family. (309 aa)
RCOM_0838580Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1705 aa)
RCOM_0001270AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1121 aa)
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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