(15 nodes) Mixed, incl. Serine-type endopeptidase inhibitor activity, and PAR1 protein network (Ricinus communis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RCOM_1600700	Uncharacterized protein. (421 aa)
	RCOM_1611810	Uncharacterized protein. (388 aa)
	RCOM_1341470	Serine-type endopeptidase inhibitor, putative. (130 aa)
	RCOM_1341480	Uncharacterized protein. (83 aa)
	RCOM_1492630	Uncharacterized protein. (463 aa)
	RCOM_0911120	Ice binding protein, putative. (477 aa)
	RCOM_0906790	Uncharacterized protein. (161 aa)
	RCOM_0814130	Cgi-62, putative. (448 aa)
	RCOM_1315280	Uncharacterized protein. (198 aa)
	RCOM_1536980	Serine-type endopeptidase inhibitor, putative. (134 aa)
	RCOM_1325460	Catalytic, putative; Belongs to the glycosyltransferase 47 family. (507 aa)
	RCOM_0835860	Uncharacterized protein. (202 aa)
	RCOM_0086730	Uncharacterized protein. (109 aa)
	RCOM_0492410	Uncharacterized protein. (588 aa)
	RCOM_0623600	Jas domain-containing protein. (186 aa)

Your Current Organism:

Ricinus communis

NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCOM_0086730	RCOM_0492410	B9SPG8	B9STJ4	Uncharacterized protein.	Uncharacterized protein.	0.493
RCOM_0086730	RCOM_0835860	B9SPG8	B9S8U1	Uncharacterized protein.	Uncharacterized protein.	0.413
RCOM_0086730	RCOM_1341470	B9SPG8	B9RMY6	Uncharacterized protein.	Serine-type endopeptidase inhibitor, putative.	0.402
RCOM_0086730	RCOM_1341480	B9SPG8	B9RMY7	Uncharacterized protein.	Uncharacterized protein.	0.490
RCOM_0086730	RCOM_1492630	B9SPG8	B9RQI3	Uncharacterized protein.	Uncharacterized protein.	0.482
RCOM_0086730	RCOM_1600700	B9SPG8	B9R8L2	Uncharacterized protein.	Uncharacterized protein.	0.467
RCOM_0086730	RCOM_1611810	B9SPG8	B9RDB6	Uncharacterized protein.	Uncharacterized protein.	0.470
RCOM_0492410	RCOM_0086730	B9STJ4	B9SPG8	Uncharacterized protein.	Uncharacterized protein.	0.493
RCOM_0492410	RCOM_0623600	B9STJ4	B9STT1	Uncharacterized protein.	Jas domain-containing protein.	0.492
RCOM_0492410	RCOM_0814130	B9STJ4	B9RY35	Uncharacterized protein.	Cgi-62, putative.	0.426
RCOM_0492410	RCOM_0835860	B9STJ4	B9S8U1	Uncharacterized protein.	Uncharacterized protein.	0.469
RCOM_0492410	RCOM_0911120	B9STJ4	B9RTK7	Uncharacterized protein.	Ice binding protein, putative.	0.494
RCOM_0492410	RCOM_1315280	B9STJ4	B9RZ05	Uncharacterized protein.	Uncharacterized protein.	0.473
RCOM_0492410	RCOM_1325460	B9STJ4	B9S214	Uncharacterized protein.	Catalytic, putative; Belongs to the glycosyltransferase 47 family.	0.414
RCOM_0492410	RCOM_1341470	B9STJ4	B9RMY6	Uncharacterized protein.	Serine-type endopeptidase inhibitor, putative.	0.457
RCOM_0492410	RCOM_1341480	B9STJ4	B9RMY7	Uncharacterized protein.	Uncharacterized protein.	0.478
RCOM_0492410	RCOM_1492630	B9STJ4	B9RQI3	Uncharacterized protein.	Uncharacterized protein.	0.475
RCOM_0492410	RCOM_1536980	B9STJ4	B9S0U3	Uncharacterized protein.	Serine-type endopeptidase inhibitor, putative.	0.462
RCOM_0492410	RCOM_1600700	B9STJ4	B9R8L2	Uncharacterized protein.	Uncharacterized protein.	0.519
RCOM_0492410	RCOM_1611810	B9STJ4	B9RDB6	Uncharacterized protein.	Uncharacterized protein.	0.468