19 items (Ricinus communis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	RCOM_1691810	Polygalacturonase, putative. (446 aa)
	RCOM_1616290	Polygalacturonase, putative; Belongs to the glycosyl hydrolase 28 family. (472 aa)
	RCOM_1433940	Pectinesterase; In the C-terminal section; belongs to the pectinesterase family. (548 aa)
	RCOM_1582310	Exopolygalacturonase, putative; Belongs to the glycosyl hydrolase 28 family. (452 aa)
	RCOM_1346480	Pectinesterase-2, putative. (335 aa)
	RCOM_1346520	Pectinesterase. (663 aa)
	RCOM_0708330	Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family. (541 aa)
	RCOM_1243660	Pectinesterase; In the C-terminal section; belongs to the pectinesterase family. (562 aa)
	RCOM_1460660	Pectinesterase-2, putative; In the C-terminal section; belongs to the pectinesterase family. (552 aa)
	RCOM_0899050	Polygalacturonase, putative. (770 aa)
	RCOM_1002690	Polygalacturonase, putative. (479 aa)
	RCOM_0703170	Polygalacturonase, putative. (387 aa)
	RCOM_0527980	Polygalacturonase, putative. (519 aa)
	RCOM_0092490	Pentatricopeptide repeat-containing protein, putative; Belongs to the glycosyl hydrolase 28 family. (818 aa)
	RCOM_1801140	Pectinesterase, putative. (189 aa)
	RCOM_1829840	Uncharacterized protein. (392 aa)
	RCOM_1950360	SGNH_hydro domain-containing protein. (415 aa)
	RCOM_1971590	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family. (195 aa)
	RCOM_1982630	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family. (197 aa)

Your Current Organism:

Ricinus communis

NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCOM_0092490	RCOM_0527980	B9SL84	B9SH92	Pentatricopeptide repeat-containing protein, putative; Belongs to the glycosyl hydrolase 28 family.	Polygalacturonase, putative.	0.504
RCOM_0092490	RCOM_0703170	B9SL84	B9SEE6	Pentatricopeptide repeat-containing protein, putative; Belongs to the glycosyl hydrolase 28 family.	Polygalacturonase, putative.	0.462
RCOM_0092490	RCOM_1829840	B9SL84	B9TFL5	Pentatricopeptide repeat-containing protein, putative; Belongs to the glycosyl hydrolase 28 family.	Uncharacterized protein.	0.421
RCOM_0092490	RCOM_1971590	B9SL84	B9TNX2	Pentatricopeptide repeat-containing protein, putative; Belongs to the glycosyl hydrolase 28 family.	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	0.400
RCOM_0092490	RCOM_1982630	B9SL84	B9TPU8	Pentatricopeptide repeat-containing protein, putative; Belongs to the glycosyl hydrolase 28 family.	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	0.508
RCOM_0527980	RCOM_0092490	B9SH92	B9SL84	Polygalacturonase, putative.	Pentatricopeptide repeat-containing protein, putative; Belongs to the glycosyl hydrolase 28 family.	0.504
RCOM_0527980	RCOM_1243660	B9SH92	B9RSH9	Polygalacturonase, putative.	Pectinesterase; In the C-terminal section; belongs to the pectinesterase family.	0.504
RCOM_0527980	RCOM_1460660	B9SH92	B9RU20	Polygalacturonase, putative.	Pectinesterase-2, putative; In the C-terminal section; belongs to the pectinesterase family.	0.491
RCOM_0527980	RCOM_1829840	B9SH92	B9TFL5	Polygalacturonase, putative.	Uncharacterized protein.	0.428
RCOM_0527980	RCOM_1971590	B9SH92	B9TNX2	Polygalacturonase, putative.	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	0.460
RCOM_0527980	RCOM_1982630	B9SH92	B9TPU8	Polygalacturonase, putative.	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	0.506
RCOM_0703170	RCOM_0092490	B9SEE6	B9SL84	Polygalacturonase, putative.	Pentatricopeptide repeat-containing protein, putative; Belongs to the glycosyl hydrolase 28 family.	0.462
RCOM_0703170	RCOM_1433940	B9SEE6	B9RFE1	Polygalacturonase, putative.	Pectinesterase; In the C-terminal section; belongs to the pectinesterase family.	0.452
RCOM_0703170	RCOM_1971590	B9SEE6	B9TNX2	Polygalacturonase, putative.	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	0.446
RCOM_0703170	RCOM_1982630	B9SEE6	B9TPU8	Polygalacturonase, putative.	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	0.462
RCOM_0708330	RCOM_1801140	B9RR19	B9TCP6	Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.	Pectinesterase, putative.	0.505
RCOM_0708330	RCOM_1950360	B9RR19	B9THU1	Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.	SGNH_hydro domain-containing protein.	0.430
RCOM_0899050	RCOM_1971590	B9RV49	B9TNX2	Polygalacturonase, putative.	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	0.450
RCOM_0899050	RCOM_1982630	B9RV49	B9TPU8	Polygalacturonase, putative.	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	0.482
RCOM_1002690	RCOM_1243660	B9RZX1	B9RSH9	Polygalacturonase, putative.	Pectinesterase; In the C-terminal section; belongs to the pectinesterase family.	0.584