19 items (Ricinus communis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RCOM_1438930	Uncharacterized protein. (470 aa)
	RCOM_1443920	Uncharacterized protein. (211 aa)
	RCOM_1348340	Uncharacterized protein. (156 aa)
	RCOM_0912800	Basic 7S globulin 2 small subunit, putative; Belongs to the peptidase A1 family. (411 aa)
	RCOM_0912820	Basic 7S globulin 2 small subunit, putative; Belongs to the peptidase A1 family. (433 aa)
	RCOM_1134830	Uncharacterized protein. (227 aa)
	RCOM_1174050	Uncharacterized protein. (297 aa)
	RCOM_1003750	DNA binding protein, putative. (186 aa)
	RCOM_1210020	F-box domain-containing protein. (193 aa)
	RCOM_0730440	Uncharacterized protein. (576 aa)
	RCOM_1410430	Uncharacterized protein. (277 aa)
	RCOM_1163390	Uncharacterized protein. (264 aa)
	RCOM_0723020	Rx_N domain-containing protein. (170 aa)
	RCOM_0091390	FLZ-type domain-containing protein. (113 aa)
	RCOM_1025300	Uncharacterized protein. (289 aa)
	RCOM_0782890	Uncharacterized protein. (219 aa)
	RCOM_0195630	Axial regulator YABBY1, putative. (214 aa)
	RCOM_0101920	NB-ARC domain-containing protein. (76 aa)
	RCOM_2061670	Uncharacterized protein. (97 aa)

Your Current Organism:

Ricinus communis

NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCOM_0091390	RCOM_0730440	B9SL74	B9S361	FLZ-type domain-containing protein.	Uncharacterized protein.	0.410
RCOM_0091390	RCOM_0782890	B9SL74	B9SXC1	FLZ-type domain-containing protein.	Uncharacterized protein.	0.515
RCOM_0091390	RCOM_0912800	B9SL74	B9RTU3	FLZ-type domain-containing protein.	Basic 7S globulin 2 small subunit, putative; Belongs to the peptidase A1 family.	0.435
RCOM_0091390	RCOM_0912820	B9SL74	B9RTU5	FLZ-type domain-containing protein.	Basic 7S globulin 2 small subunit, putative; Belongs to the peptidase A1 family.	0.441
RCOM_0091390	RCOM_1003750	B9SL74	B9S006	FLZ-type domain-containing protein.	DNA binding protein, putative.	0.462
RCOM_0091390	RCOM_1025300	B9SL74	B9SNP7	FLZ-type domain-containing protein.	Uncharacterized protein.	0.461
RCOM_0091390	RCOM_1163390	B9SL74	B9SD77	FLZ-type domain-containing protein.	Uncharacterized protein.	0.476
RCOM_0091390	RCOM_1210020	B9SL74	B9S2M2	FLZ-type domain-containing protein.	F-box domain-containing protein.	0.499
RCOM_0091390	RCOM_1348340	B9SL74	B9RNJ2	FLZ-type domain-containing protein.	Uncharacterized protein.	0.449
RCOM_0091390	RCOM_1443920	B9SL74	B9RGT7	FLZ-type domain-containing protein.	Uncharacterized protein.	0.423
RCOM_0091390	RCOM_2061670	B9SL74	B9TNE7	FLZ-type domain-containing protein.	Uncharacterized protein.	0.446
RCOM_0101920	RCOM_0195630	B9T8H7	B9T2V4	NB-ARC domain-containing protein.	Axial regulator YABBY1, putative.	0.481
RCOM_0101920	RCOM_0723020	B9T8H7	B9SFT5	NB-ARC domain-containing protein.	Rx_N domain-containing protein.	0.515
RCOM_0101920	RCOM_0730440	B9T8H7	B9S361	NB-ARC domain-containing protein.	Uncharacterized protein.	0.470
RCOM_0101920	RCOM_0782890	B9T8H7	B9SXC1	NB-ARC domain-containing protein.	Uncharacterized protein.	0.472
RCOM_0101920	RCOM_0912800	B9T8H7	B9RTU3	NB-ARC domain-containing protein.	Basic 7S globulin 2 small subunit, putative; Belongs to the peptidase A1 family.	0.435
RCOM_0101920	RCOM_0912820	B9T8H7	B9RTU5	NB-ARC domain-containing protein.	Basic 7S globulin 2 small subunit, putative; Belongs to the peptidase A1 family.	0.441
RCOM_0101920	RCOM_1003750	B9T8H7	B9S006	NB-ARC domain-containing protein.	DNA binding protein, putative.	0.433
RCOM_0101920	RCOM_1134830	B9T8H7	B9RVF0	NB-ARC domain-containing protein.	Uncharacterized protein.	0.496
RCOM_0101920	RCOM_1163390	B9T8H7	B9SD77	NB-ARC domain-containing protein.	Uncharacterized protein.	0.419