STRINGSTRING
RCOM_0851900 RCOM_0851900 RCOM_0900710 RCOM_0900710 RCOM_1175540 RCOM_1175540 RCOM_0811130 RCOM_0811130 RCOM_1178310 RCOM_1178310 RCOM_0771080 RCOM_0771080 RCOM_0729670 RCOM_0729670 RCOM_0510040 RCOM_0510040
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RCOM_0851900Small nuclear ribonucleoprotein f, putative. (62 aa)
RCOM_0900710Pre-mRNA-processing-splicing factor, putative. (2376 aa)
RCOM_1175540Pre-mRNA splicing factor, putative. (1031 aa)
RCOM_0811130U520, putative. (1809 aa)
RCOM_1178310Small nuclear ribonucleoprotein Sm D2. (169 aa)
RCOM_0771080Small nuclear ribonucleoprotein-associated protein. (275 aa)
RCOM_0729670Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (86 aa)
RCOM_0510040116 kD U5 small nuclear ribonucleoprotein component, putative. (992 aa)
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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