7 items (Ricinus communis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RCOM_1617910	WD-repeat protein, putative. (517 aa)
	RCOM_0708800	Red protein, putative. (567 aa)
	RCOM_0999650	Uncharacterized protein. (847 aa)
	RCOM_1355790	Ubiquitin-like domain-containing protein. (73 aa)
	RCOM_0774560	Nucleic acid binding protein, putative. (250 aa)
	RCOM_1321190	Microfibril-associated protein, putative. (434 aa)
	RCOM_1321210	Microfibril-associated protein, putative. (263 aa)

Your Current Organism:

Ricinus communis

NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCOM_0708800	RCOM_0774560	B9RR36	B9S791	Red protein, putative.	Nucleic acid binding protein, putative.	0.890
RCOM_0708800	RCOM_0999650	B9RR36	B9RZL7	Red protein, putative.	Uncharacterized protein.	0.811
RCOM_0708800	RCOM_1321190	B9RR36	B9SI67	Red protein, putative.	Microfibril-associated protein, putative.	0.910
RCOM_0708800	RCOM_1321210	B9RR36	B9SI69	Red protein, putative.	Microfibril-associated protein, putative.	0.910
RCOM_0708800	RCOM_1617910	B9RR36	B9RE42	Red protein, putative.	WD-repeat protein, putative.	0.992
RCOM_0774560	RCOM_0708800	B9S791	B9RR36	Nucleic acid binding protein, putative.	Red protein, putative.	0.890
RCOM_0774560	RCOM_0999650	B9S791	B9RZL7	Nucleic acid binding protein, putative.	Uncharacterized protein.	0.872
RCOM_0774560	RCOM_1321190	B9S791	B9SI67	Nucleic acid binding protein, putative.	Microfibril-associated protein, putative.	0.866
RCOM_0774560	RCOM_1321210	B9S791	B9SI69	Nucleic acid binding protein, putative.	Microfibril-associated protein, putative.	0.866
RCOM_0774560	RCOM_1355790	B9S791	B9S0L3	Nucleic acid binding protein, putative.	Ubiquitin-like domain-containing protein.	0.835
RCOM_0774560	RCOM_1617910	B9S791	B9RE42	Nucleic acid binding protein, putative.	WD-repeat protein, putative.	0.913
RCOM_0999650	RCOM_0708800	B9RZL7	B9RR36	Uncharacterized protein.	Red protein, putative.	0.811
RCOM_0999650	RCOM_0774560	B9RZL7	B9S791	Uncharacterized protein.	Nucleic acid binding protein, putative.	0.872
RCOM_0999650	RCOM_1321190	B9RZL7	B9SI67	Uncharacterized protein.	Microfibril-associated protein, putative.	0.902
RCOM_0999650	RCOM_1321210	B9RZL7	B9SI69	Uncharacterized protein.	Microfibril-associated protein, putative.	0.902
RCOM_0999650	RCOM_1355790	B9RZL7	B9S0L3	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.805
RCOM_0999650	RCOM_1617910	B9RZL7	B9RE42	Uncharacterized protein.	WD-repeat protein, putative.	0.901
RCOM_1321190	RCOM_0708800	B9SI67	B9RR36	Microfibril-associated protein, putative.	Red protein, putative.	0.910
RCOM_1321190	RCOM_0774560	B9SI67	B9S791	Microfibril-associated protein, putative.	Nucleic acid binding protein, putative.	0.866
RCOM_1321190	RCOM_0999650	B9SI67	B9RZL7	Microfibril-associated protein, putative.	Uncharacterized protein.	0.902