STRINGSTRING
RCOM_1602290 RCOM_1602290 RCOM_1497410 RCOM_1497410 RCOM_1433530 RCOM_1433530 RCOM_1433550 RCOM_1433550 RCOM_1573000 RCOM_1573000 RCOM_0919480 RCOM_0919480 RCOM_0679140 RCOM_0679140 RCOM_0910970 RCOM_0910970 RCOM_0935920 RCOM_0935920 RCOM_0634400 RCOM_0634400 RCOM_0866580 RCOM_0866580 RCOM_1178020 RCOM_1178020 RCOM_0715980 RCOM_0715980 RCOM_0553420 RCOM_0553420 RCOM_0820310 RCOM_0820310 RCOM_1186310 RCOM_1186310 RCOM_0496850 RCOM_0496850 RCOM_0382140 RCOM_0382140 RCOM_0519590 RCOM_0519590 RCOM_1168220 RCOM_1168220 RCOM_0460560 RCOM_0460560 RCOM_0036490 RCOM_0036490 RCOM_1360340 RCOM_1360340 RCOM_0000930 RCOM_0000930 RCOM_0285870 RCOM_0285870
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RCOM_1602290U2 snrnp auxiliary factor, small subunit, putative. (272 aa)
RCOM_1497410Arginine/serine-rich splicing factor, putative. (331 aa)
RCOM_1433530Arginine/serine-rich splicing factor, putative. (444 aa)
RCOM_1433550Arginine/serine-rich splicing factor, putative. (300 aa)
RCOM_1573000Uncharacterized protein. (133 aa)
RCOM_0919480Arginine/serine-rich splicing factor, putative. (179 aa)
RCOM_0679140Serine/arginine rich splicing factor, putative. (257 aa)
RCOM_0910970Stem-specific protein TSJT1, putative. (249 aa)
RCOM_0935920Stem-specific protein TSJT1, putative. (255 aa)
RCOM_0634400Hydrolase, hydrolyzing O-glycosyl compounds, putative. (282 aa)
RCOM_0866580Arginine/serine-rich splicing factor, putative. (264 aa)
RCOM_1178020Arginine/serine-rich splicing factor, putative. (292 aa)
RCOM_0715980Arginine/serine-rich splicing factor, putative. (259 aa)
RCOM_0553420U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (549 aa)
RCOM_0820310Arginine/serine-rich splicing factor, putative. (305 aa)
RCOM_1186310U2 snrnp auxiliary factor, small subunit, putative. (322 aa)
RCOM_0496850U2 snrnp auxiliary factor, small subunit, putative. (857 aa)
RCOM_0382140U2 snrnp auxiliary factor, small subunit, putative. (313 aa)
RCOM_0519590Uncharacterized protein. (136 aa)
RCOM_1168220Splicing factor u2af large subunit, putative. (844 aa)
RCOM_0460560Serine/arginine rich splicing factor, putative. (257 aa)
RCOM_0036490Serine/arginine rich splicing factor, putative. (216 aa)
RCOM_1360340Serine/arginine rich splicing factor, putative. (246 aa)
RCOM_0000930Serine/arginine rich splicing factor, putative. (265 aa)
RCOM_0285870Arginine/serine-rich splicing factor, putative. (184 aa)
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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