37 items (Ricinus communis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RCOM_1587390	WD-repeat protein, putative. (479 aa)
	RCOM_1593750	Ubiquitin-conjugating enzyme m, putative; Belongs to the ubiquitin-conjugating enzyme family. (126 aa)
	RCOM_1593880	Cop9 complex subunit, putative. (397 aa)
	RCOM_1678560	26S proteasome regulatory subunit S3, putative. (427 aa)
	RCOM_1692070	Uncharacterized protein. (136 aa)
	RCOM_1608290	Cop9 complex subunit 7a, putative. (275 aa)
	RCOM_1613810	Cop9 signalosome complex subunit, putative. (433 aa)
	RCOM_1431210	Protein binding protein, putative; Belongs to the NPH3 family. (440 aa)
	RCOM_1432220	Cullin domain-containing protein; Belongs to the cullin family. (319 aa)
	RCOM_0711530	Ring finger, putative. (138 aa)
	RCOM_0680540	Cullin-1, putative; Belongs to the cullin family. (744 aa)
	RCOM_0680550	Cullin domain-containing protein; Belongs to the cullin family. (287 aa)
	RCOM_0913520	Ubiquitin-activating enzyme E1c, putative. (449 aa)
	RCOM_1171040	Cop9 complex subunit 7a, putative. (135 aa)
	RCOM_1130690	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (261 aa)
	RCOM_1300050	Light-mediated development protein DET1, putative. (572 aa)
	RCOM_0632460	Cullin, putative; Belongs to the cullin family. (807 aa)
	RCOM_1064120	Cell division cycle protein cdt2, putative. (502 aa)
	RCOM_0836020	Cullin, putative; Belongs to the cullin family. (674 aa)
	RCOM_0701200	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (199 aa)
	RCOM_0701440	Uncharacterized protein. (157 aa)
	RCOM_0701450	Uncharacterized protein. (120 aa)
	RCOM_0487930	NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric E1 enzyme. E1 activates RUB1/NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a RUB1-ECR1 thioester and free AMP. E1 finally transfers RUB1 to the catalytic cysteine of RCE1. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily. (523 aa)
	RCOM_0553170	Ubiquitin-conjugating enzyme m, putative; Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
	RCOM_0612100	DNA damage-binding protein, putative. (558 aa)
	RCOM_1091910	DNA repair protein xp-E, putative. (1033 aa)
	RCOM_0471020	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (231 aa)
	RCOM_0495920	Tip120, putative. (1218 aa)
	RCOM_1183590	Cop9 signalosome complex subunit 8 (Csn complex subunit 8), putative. (176 aa)
	RCOM_0204710	Jun activation domain binding protein, putative. (367 aa)
	RCOM_0364210	Signalosome subunit, putative. (318 aa)
	RCOM_0006410	Uncharacterized protein. (271 aa)
	RCOM_0340260	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (321 aa)
	RCOM_0191930	Cop9 complex subunit 7a, putative. (253 aa)
	RCOM_1394390	Cop9 signalosome complex subunit, putative. (439 aa)
	RCOM_1197790	Amsh, putative. (514 aa)
	RCOM_0083800	Ring finger, putative. (83 aa)

Your Current Organism:

Ricinus communis

NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCOM_0006410	RCOM_0083800	B9SZQ0	B9T8A0	Uncharacterized protein.	Ring finger, putative.	0.836
RCOM_0006410	RCOM_0191930	B9SZQ0	B9T291	Uncharacterized protein.	Cop9 complex subunit 7a, putative.	0.425
RCOM_0006410	RCOM_0204710	B9SZQ0	B9SPP1	Uncharacterized protein.	Jun activation domain binding protein, putative.	0.840
RCOM_0006410	RCOM_0340260	B9SZQ0	B9T0T6	Uncharacterized protein.	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	0.752
RCOM_0006410	RCOM_0364210	B9SZQ0	B9ST91	Uncharacterized protein.	Signalosome subunit, putative.	0.638
RCOM_0006410	RCOM_0471020	B9SZQ0	B9SMU9	Uncharacterized protein.	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	0.724
RCOM_0006410	RCOM_0487930	B9SZQ0	B9SDW7	Uncharacterized protein.	NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric E1 enzyme. E1 activates RUB1/NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a RUB1-ECR1 thioester and free AMP. E1 finally transfers RUB1 to the catalytic cysteine of RCE1. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily.	0.666
RCOM_0006410	RCOM_0495920	B9SZQ0	B9SPA7	Uncharacterized protein.	Tip120, putative.	0.922
RCOM_0006410	RCOM_0553170	B9SZQ0	B9SGH9	Uncharacterized protein.	Ubiquitin-conjugating enzyme m, putative; Belongs to the ubiquitin-conjugating enzyme family.	0.734
RCOM_0006410	RCOM_0701200	B9SZQ0	B9SC03	Uncharacterized protein.	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	0.724
RCOM_0006410	RCOM_0711530	B9SZQ0	B9RR99	Uncharacterized protein.	Ring finger, putative.	0.836
RCOM_0006410	RCOM_0913520	B9SZQ0	B9RTW5	Uncharacterized protein.	Ubiquitin-activating enzyme E1c, putative.	0.746
RCOM_0006410	RCOM_1130690	B9SZQ0	B9RYL4	Uncharacterized protein.	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	0.752
RCOM_0006410	RCOM_1171040	B9SZQ0	B9RVR0	Uncharacterized protein.	Cop9 complex subunit 7a, putative.	0.425
RCOM_0006410	RCOM_1183590	B9SZQ0	B9SPM0	Uncharacterized protein.	Cop9 signalosome complex subunit 8 (Csn complex subunit 8), putative.	0.630
RCOM_0006410	RCOM_1197790	B9SZQ0	B9T631	Uncharacterized protein.	Amsh, putative.	0.485
RCOM_0006410	RCOM_1394390	B9SZQ0	B9T2W1	Uncharacterized protein.	Cop9 signalosome complex subunit, putative.	0.800
RCOM_0006410	RCOM_1431210	B9SZQ0	B9RF42	Uncharacterized protein.	Protein binding protein, putative; Belongs to the NPH3 family.	0.706
RCOM_0006410	RCOM_1593750	B9SZQ0	B9R7Q3	Uncharacterized protein.	Ubiquitin-conjugating enzyme m, putative; Belongs to the ubiquitin-conjugating enzyme family.	0.734
RCOM_0006410	RCOM_1593880	B9SZQ0	B9R7R6	Uncharacterized protein.	Cop9 complex subunit, putative.	0.834