26 items (Ricinus communis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RCOM_0511540	Uncharacterized protein. (645 aa)
	RCOM_0275810	Hec1 protein, putative. (574 aa)
	RCOM_0214170	Microtubule associated protein xmap215, putative. (1992 aa)
	RCOM_0413680	Nucleic acid binding protein, putative. (257 aa)
	RCOM_1360350	Plant mitotic spindle assembly checkpoint protein mad2, putative. (87 aa)
	RCOM_1097680	Plant mitotic spindle assembly checkpoint protein mad2, putative. (67 aa)
	RCOM_1205220	Plant mitotic spindle assembly checkpoint protein mad2, putative. (55 aa)
	RCOM_1319100	Kinetochore protein nuf2, putative. (450 aa)
	RCOM_1602300	Bubr1, putative. (380 aa)
	RCOM_1509610	Uncharacterized protein. (342 aa)
	RCOM_1622080	Initiation factor 5a, putative. (509 aa)
	RCOM_1610690	Uncharacterized protein. (265 aa)
	RCOM_1619040	Uncharacterized protein. (242 aa)
	RCOM_1032370	Dual specificity protein kinase-ttk, putative. (832 aa)
	RCOM_1081200	Plant mitotic spindle assembly checkpoint protein mad2, putative. (207 aa)
	RCOM_0918390	Uncharacterized protein. (348 aa)
	RCOM_0920380	SKA2 domain-containing protein. (152 aa)
	RCOM_1173500	Mitotic checkpoint serine/threonine-protein kinase bub1 and bubr1, putative. (586 aa)
	RCOM_0814160	Uncharacterized protein. (261 aa)
	RCOM_0423070	Uncharacterized protein. (300 aa)
	RCOM_1482440	Uncharacterized protein. (112 aa)
	RCOM_1482560	WD_REPEATS_REGION domain-containing protein. (799 aa)
	RCOM_0847600	Uncharacterized protein. (75 aa)
	RCOM_0175090	Mitotic checkpoint protein bub3, putative. (342 aa)
	RCOM_0496470	Spindle assembly checkpoint component mad1, putative. (728 aa)
	RCOM_0511550	Uncharacterized protein. (97 aa)

Your Current Organism:

Ricinus communis

NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCOM_0175090	RCOM_0214170	B9SND5	B9T7P5	Mitotic checkpoint protein bub3, putative.	Microtubule associated protein xmap215, putative.	0.595
RCOM_0175090	RCOM_0275810	B9SND5	B9T7Y6	Mitotic checkpoint protein bub3, putative.	Hec1 protein, putative.	0.866
RCOM_0175090	RCOM_0496470	B9SND5	B9SPB2	Mitotic checkpoint protein bub3, putative.	Spindle assembly checkpoint component mad1, putative.	0.914
RCOM_0175090	RCOM_0511540	B9SND5	B9SSJ2	Mitotic checkpoint protein bub3, putative.	Uncharacterized protein.	0.731
RCOM_0175090	RCOM_0511550	B9SND5	B9SSJ3	Mitotic checkpoint protein bub3, putative.	Uncharacterized protein.	0.731
RCOM_0175090	RCOM_1032370	B9SND5	B9RJ96	Mitotic checkpoint protein bub3, putative.	Dual specificity protein kinase-ttk, putative.	0.602
RCOM_0175090	RCOM_1081200	B9SND5	B9RMJ8	Mitotic checkpoint protein bub3, putative.	Plant mitotic spindle assembly checkpoint protein mad2, putative.	0.909
RCOM_0175090	RCOM_1097680	B9SND5	B9T0S1	Mitotic checkpoint protein bub3, putative.	Plant mitotic spindle assembly checkpoint protein mad2, putative.	0.909
RCOM_0175090	RCOM_1173500	B9SND5	B9RVW6	Mitotic checkpoint protein bub3, putative.	Mitotic checkpoint serine/threonine-protein kinase bub1 and bubr1, putative.	0.938
RCOM_0175090	RCOM_1205220	B9SND5	B9SWE8	Mitotic checkpoint protein bub3, putative.	Plant mitotic spindle assembly checkpoint protein mad2, putative.	0.909
RCOM_0175090	RCOM_1319100	B9SND5	B9STF6	Mitotic checkpoint protein bub3, putative.	Kinetochore protein nuf2, putative.	0.853
RCOM_0175090	RCOM_1360350	B9SND5	B9T1E2	Mitotic checkpoint protein bub3, putative.	Plant mitotic spindle assembly checkpoint protein mad2, putative.	0.909
RCOM_0175090	RCOM_1509610	B9SND5	B9RAX8	Mitotic checkpoint protein bub3, putative.	Uncharacterized protein.	0.719
RCOM_0175090	RCOM_1602300	B9SND5	B9R8U9	Mitotic checkpoint protein bub3, putative.	Bubr1, putative.	0.938
RCOM_0175090	RCOM_1610690	B9SND5	B9RD75	Mitotic checkpoint protein bub3, putative.	Uncharacterized protein.	0.622
RCOM_0175090	RCOM_1622080	B9SND5	B9RCY4	Mitotic checkpoint protein bub3, putative.	Initiation factor 5a, putative.	0.540
RCOM_0214170	RCOM_0175090	B9T7P5	B9SND5	Microtubule associated protein xmap215, putative.	Mitotic checkpoint protein bub3, putative.	0.595
RCOM_0214170	RCOM_0275810	B9T7P5	B9T7Y6	Microtubule associated protein xmap215, putative.	Hec1 protein, putative.	0.911
RCOM_0214170	RCOM_0496470	B9T7P5	B9SPB2	Microtubule associated protein xmap215, putative.	Spindle assembly checkpoint component mad1, putative.	0.512
RCOM_0214170	RCOM_1081200	B9T7P5	B9RMJ8	Microtubule associated protein xmap215, putative.	Plant mitotic spindle assembly checkpoint protein mad2, putative.	0.626