9 items (Ricinus communis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:
	RCOM_0878400	Phytoene synthase, chloroplast, putative. (385 aa)
	RCOM_1450010	Farnesyl-diphosphate farnesyltransferase, putative. (412 aa)
	RCOM_0013160	Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family. (372 aa)
	RCOM_0878410	Phytoene synthase, chloroplast, putative. (370 aa)
	RCOM_0850620	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (438 aa)
	RCOM_0286430	Phytoene synthase, chloroplast, putative. (428 aa)
	RCOM_1449900	Uncharacterized protein. (69 aa)
	RCOM_1556410	Protoheme IX farnesyltransferase, putative. (333 aa)
	RCOM_0553150	Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family. (369 aa)

Your Current Organism:

Ricinus communis

NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCOM_0013160	RCOM_0286430	B9SYX2	B9T406	Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family.	Phytoene synthase, chloroplast, putative.	0.953
RCOM_0013160	RCOM_0553150	B9SYX2	B9SGH7	Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family.	Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family.	0.902
RCOM_0013160	RCOM_0850620	B9SYX2	B9RUT5	Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.925
RCOM_0013160	RCOM_0878400	B9SYX2	B9SM48	Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family.	Phytoene synthase, chloroplast, putative.	0.919
RCOM_0013160	RCOM_0878410	B9SYX2	B9SM49	Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family.	Phytoene synthase, chloroplast, putative.	0.614
RCOM_0013160	RCOM_1449900	B9SYX2	B9RHC2	Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein.	0.924
RCOM_0013160	RCOM_1450010	B9SYX2	B9RHC3	Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family.	Farnesyl-diphosphate farnesyltransferase, putative.	0.636
RCOM_0286430	RCOM_0013160	B9T406	B9SYX2	Phytoene synthase, chloroplast, putative.	Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family.	0.953
RCOM_0286430	RCOM_0553150	B9T406	B9SGH7	Phytoene synthase, chloroplast, putative.	Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family.	0.953
RCOM_0286430	RCOM_0850620	B9T406	B9RUT5	Phytoene synthase, chloroplast, putative.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.815
RCOM_0286430	RCOM_0878400	B9T406	B9SM48	Phytoene synthase, chloroplast, putative.	Phytoene synthase, chloroplast, putative.	0.902
RCOM_0286430	RCOM_1449900	B9T406	B9RHC2	Phytoene synthase, chloroplast, putative.	Uncharacterized protein.	0.446
RCOM_0286430	RCOM_1450010	B9T406	B9RHC3	Phytoene synthase, chloroplast, putative.	Farnesyl-diphosphate farnesyltransferase, putative.	0.446
RCOM_0553150	RCOM_0013160	B9SGH7	B9SYX2	Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family.	Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family.	0.902
RCOM_0553150	RCOM_0286430	B9SGH7	B9T406	Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family.	Phytoene synthase, chloroplast, putative.	0.953
RCOM_0553150	RCOM_0850620	B9SGH7	B9RUT5	Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.925
RCOM_0553150	RCOM_0878400	B9SGH7	B9SM48	Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family.	Phytoene synthase, chloroplast, putative.	0.921
RCOM_0553150	RCOM_0878410	B9SGH7	B9SM49	Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family.	Phytoene synthase, chloroplast, putative.	0.624
RCOM_0553150	RCOM_1449900	B9SGH7	B9RHC2	Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein.	0.928
RCOM_0553150	RCOM_1450010	B9SGH7	B9RHC3	Geranyl geranyl pyrophosphate synthase, putative; Belongs to the FPP/GGPP synthase family.	Farnesyl-diphosphate farnesyltransferase, putative.	0.656