19 items (Ricinus communis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RCOM_0169080	Pten, putative. (420 aa)
	RCOM_0956930	Protein-tyrosine phosphatase 1, plants, putative. (332 aa)
	RCOM_0023050	Hydrolase, putative. (324 aa)
	RCOM_0100300	Tyrosine-protein phosphatase SIW14, putative. (212 aa)
	RCOM_2100530	Arsenate reductase, putative. (117 aa)
	RCOM_0511150	Dual specificity protein phosphatase, putative. (270 aa)
	RCOM_1153030	annotation not available (636 aa)
	RCOM_0698990	Uncharacterized protein. (453 aa)
	RCOM_0812140	Phosphoprotein phosphatase, putative. (612 aa)
	RCOM_1635810	Dual specificity phosphatase Cdc25, putative. (131 aa)
	RCOM_0912790	Dual specificity protein phosphatase, putative. (174 aa)
	RCOM_1341920	Uncharacterized protein. (1249 aa)
	RCOM_1048860	Protein-tyrosine phosphatase mitochondrial 1, mitochondrial, putative. (284 aa)
	RCOM_1608680	Protein-tyrosine phosphatase mitochondrial 1, mitochondrial, putative. (324 aa)
	RCOM_1504160	Phosphoprotein phosphatase, putative. (951 aa)
	RCOM_0189730	Dual specificity protein phosphatase, putative. (679 aa)
	RCOM_0006390	Protein-tyrosine phosphatase mitochondrial 1, mitochondrial, putative. (333 aa)
	RCOM_0794240	Dual specificity protein phosphatase, putative. (725 aa)
	RCOM_0792870	Low molecular weight protein-tyrosine-phosphatase, putative. (172 aa)

Your Current Organism:

Ricinus communis

NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCOM_0169080	RCOM_0792870	B9T3S6	B9SSV5	Pten, putative.	Low molecular weight protein-tyrosine-phosphatase, putative.	0.554
RCOM_0169080	RCOM_0912790	B9T3S6	B9RTU2	Pten, putative.	Dual specificity protein phosphatase, putative.	0.508
RCOM_0169080	RCOM_0956930	B9T3S6	B9T701	Pten, putative.	Protein-tyrosine phosphatase 1, plants, putative.	0.430
RCOM_0169080	RCOM_1341920	B9T3S6	B9RN01	Pten, putative.	Uncharacterized protein.	0.520
RCOM_0169080	RCOM_1504160	B9T3S6	B9RA78	Pten, putative.	Phosphoprotein phosphatase, putative.	0.515
RCOM_0189730	RCOM_0956930	B9T147	B9T701	Dual specificity protein phosphatase, putative.	Protein-tyrosine phosphatase 1, plants, putative.	0.546
RCOM_0511150	RCOM_0956930	B9SSI3	B9T701	Dual specificity protein phosphatase, putative.	Protein-tyrosine phosphatase 1, plants, putative.	0.546
RCOM_0792870	RCOM_0169080	B9SSV5	B9T3S6	Low molecular weight protein-tyrosine-phosphatase, putative.	Pten, putative.	0.554
RCOM_0792870	RCOM_0912790	B9SSV5	B9RTU2	Low molecular weight protein-tyrosine-phosphatase, putative.	Dual specificity protein phosphatase, putative.	0.450
RCOM_0792870	RCOM_0956930	B9SSV5	B9T701	Low molecular weight protein-tyrosine-phosphatase, putative.	Protein-tyrosine phosphatase 1, plants, putative.	0.523
RCOM_0792870	RCOM_1341920	B9SSV5	B9RN01	Low molecular weight protein-tyrosine-phosphatase, putative.	Uncharacterized protein.	0.526
RCOM_0792870	RCOM_1504160	B9SSV5	B9RA78	Low molecular weight protein-tyrosine-phosphatase, putative.	Phosphoprotein phosphatase, putative.	0.548
RCOM_0794240	RCOM_0956930	B9SVN2	B9T701	Dual specificity protein phosphatase, putative.	Protein-tyrosine phosphatase 1, plants, putative.	0.546
RCOM_0812140	RCOM_1153030	B9RYC0	B9SFZ6	Phosphoprotein phosphatase, putative.	annotation not available	0.901
RCOM_0912790	RCOM_0169080	B9RTU2	B9T3S6	Dual specificity protein phosphatase, putative.	Pten, putative.	0.508
RCOM_0912790	RCOM_0792870	B9RTU2	B9SSV5	Dual specificity protein phosphatase, putative.	Low molecular weight protein-tyrosine-phosphatase, putative.	0.450
RCOM_0912790	RCOM_0956930	B9RTU2	B9T701	Dual specificity protein phosphatase, putative.	Protein-tyrosine phosphatase 1, plants, putative.	0.628
RCOM_0912790	RCOM_1341920	B9RTU2	B9RN01	Dual specificity protein phosphatase, putative.	Uncharacterized protein.	0.418
RCOM_0956930	RCOM_0169080	B9T701	B9T3S6	Protein-tyrosine phosphatase 1, plants, putative.	Pten, putative.	0.430
RCOM_0956930	RCOM_0189730	B9T701	B9T147	Protein-tyrosine phosphatase 1, plants, putative.	Dual specificity protein phosphatase, putative.	0.546