19 items (Ricinus communis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RCOM_1516150	Uncharacterized protein. (331 aa)
	RCOM_1722960	Uncharacterized protein. (1384 aa)
	RCOM_0799040	Serine/threonine-protein kinase, putative; Belongs to the protein kinase superfamily. (293 aa)
	RCOM_0920380	SKA2 domain-containing protein. (152 aa)
	RCOM_1754220	Calmodulin binding protein, putative. (435 aa)
	RCOM_1612520	Serine/threonine-protein kinase, putative. (260 aa)
	RCOM_1610690	Uncharacterized protein. (265 aa)
	RCOM_1602300	Bubr1, putative. (380 aa)
	RCOM_0294310	Bipolar kinesin KRP-130, putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1044 aa)
	RCOM_1264020	Bipolar kinesin KRP-130, putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1053 aa)
	RCOM_0082390	Uncharacterized protein. (432 aa)
	RCOM_0293150	Bipolar kinesin KRP-130, putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1530 aa)
	RCOM_1319100	Kinetochore protein nuf2, putative. (450 aa)
	RCOM_0530650	HAUS6_N domain-containing protein. (708 aa)
	RCOM_0790280	Uncharacterized protein. (809 aa)
	RCOM_1118750	Uncharacterized protein. (280 aa)
	RCOM_1482560	WD_REPEATS_REGION domain-containing protein. (799 aa)
	RCOM_1482440	Uncharacterized protein. (112 aa)
	RCOM_0423070	Uncharacterized protein. (300 aa)

Your Current Organism:

Ricinus communis

NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCOM_0082390	RCOM_0530650	B9T2U3	B9SLQ5	Uncharacterized protein.	HAUS6_N domain-containing protein.	0.767
RCOM_0082390	RCOM_0790280	B9T2U3	B9SIV5	Uncharacterized protein.	Uncharacterized protein.	0.741
RCOM_0082390	RCOM_1118750	B9T2U3	B9SH63	Uncharacterized protein.	Uncharacterized protein.	0.613
RCOM_0082390	RCOM_1516150	B9T2U3	B9SDB9	Uncharacterized protein.	Uncharacterized protein.	0.858
RCOM_0293150	RCOM_0799040	B9SWG6	B9RRX5	Bipolar kinesin KRP-130, putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Serine/threonine-protein kinase, putative; Belongs to the protein kinase superfamily.	0.737
RCOM_0293150	RCOM_1319100	B9SWG6	B9STF6	Bipolar kinesin KRP-130, putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinetochore protein nuf2, putative.	0.821
RCOM_0293150	RCOM_1602300	B9SWG6	B9R8U9	Bipolar kinesin KRP-130, putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Bubr1, putative.	0.720
RCOM_0293150	RCOM_1610690	B9SWG6	B9RD75	Bipolar kinesin KRP-130, putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.510
RCOM_0293150	RCOM_1612520	B9SWG6	B9RDF3	Bipolar kinesin KRP-130, putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Serine/threonine-protein kinase, putative.	0.737
RCOM_0294310	RCOM_0799040	B9T432	B9RRX5	Bipolar kinesin KRP-130, putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Serine/threonine-protein kinase, putative; Belongs to the protein kinase superfamily.	0.737
RCOM_0294310	RCOM_1319100	B9T432	B9STF6	Bipolar kinesin KRP-130, putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinetochore protein nuf2, putative.	0.821
RCOM_0294310	RCOM_1602300	B9T432	B9R8U9	Bipolar kinesin KRP-130, putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Bubr1, putative.	0.715
RCOM_0294310	RCOM_1610690	B9T432	B9RD75	Bipolar kinesin KRP-130, putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.510
RCOM_0294310	RCOM_1612520	B9T432	B9RDF3	Bipolar kinesin KRP-130, putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Serine/threonine-protein kinase, putative.	0.737
RCOM_0530650	RCOM_0082390	B9SLQ5	B9T2U3	HAUS6_N domain-containing protein.	Uncharacterized protein.	0.767
RCOM_0530650	RCOM_0790280	B9SLQ5	B9SIV5	HAUS6_N domain-containing protein.	Uncharacterized protein.	0.740
RCOM_0530650	RCOM_1118750	B9SLQ5	B9SH63	HAUS6_N domain-containing protein.	Uncharacterized protein.	0.611
RCOM_0530650	RCOM_1516150	B9SLQ5	B9SDB9	HAUS6_N domain-containing protein.	Uncharacterized protein.	0.788
RCOM_0790280	RCOM_0082390	B9SIV5	B9T2U3	Uncharacterized protein.	Uncharacterized protein.	0.741
RCOM_0790280	RCOM_0530650	B9SIV5	B9SLQ5	Uncharacterized protein.	HAUS6_N domain-containing protein.	0.740