12 items (Ricinus communis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RCOM_1612190	Glutathione-s-transferase theta, gst, putative; Belongs to the GST superfamily. (225 aa)
	RCOM_0262230	Phenylalanine ammonia-lyase. (719 aa)
	RCOM_0543910	Phenylalanine ammonia-lyase, putative; Belongs to the PAL/histidase family. (716 aa)
	RCOM_0670030	Fumarylacetoacetase. (421 aa)
	RCOM_1192240	4-hydroxyphenylpyruvate dioxygenase. (441 aa)
	RCOM_1355480	Phenylalanine ammonia-lyase. (714 aa)
	RCOM_1299540	Glutathione-s-transferase theta, gst, putative; Belongs to the GST superfamily. (221 aa)
	RCOM_1743950	Homogentisate 1,2-dioxygenase, putative. (457 aa)
	RCOM_1046210	Phenylalanine ammonia-lyase, putative. (93 aa)
	RCOM_1046200	Ammonia ligase, putative; Belongs to the PAL/histidase family. (309 aa)
	RCOM_1046190	Uncharacterized protein. (253 aa)
	RCOM_1046180	Phenylalanine ammonia-lyase, putative; Belongs to the PAL/histidase family. (688 aa)

Your Current Organism:

Ricinus communis

NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCOM_0670030	RCOM_1192240	B9S3J5	B9S300	Fumarylacetoacetase.	4-hydroxyphenylpyruvate dioxygenase.	0.958
RCOM_0670030	RCOM_1299540	B9S3J5	B9S069	Fumarylacetoacetase.	Glutathione-s-transferase theta, gst, putative; Belongs to the GST superfamily.	0.985
RCOM_0670030	RCOM_1612190	B9S3J5	B9RDD2	Fumarylacetoacetase.	Glutathione-s-transferase theta, gst, putative; Belongs to the GST superfamily.	0.985
RCOM_0670030	RCOM_1743950	B9S3J5	B9RXB8	Fumarylacetoacetase.	Homogentisate 1,2-dioxygenase, putative.	0.949
RCOM_1046190	RCOM_1046200	B9RK34	B9RK35	Uncharacterized protein.	Ammonia ligase, putative; Belongs to the PAL/histidase family.	0.687
RCOM_1046200	RCOM_1046190	B9RK35	B9RK34	Ammonia ligase, putative; Belongs to the PAL/histidase family.	Uncharacterized protein.	0.687
RCOM_1192240	RCOM_0670030	B9S300	B9S3J5	4-hydroxyphenylpyruvate dioxygenase.	Fumarylacetoacetase.	0.958
RCOM_1192240	RCOM_1299540	B9S300	B9S069	4-hydroxyphenylpyruvate dioxygenase.	Glutathione-s-transferase theta, gst, putative; Belongs to the GST superfamily.	0.614
RCOM_1192240	RCOM_1612190	B9S300	B9RDD2	4-hydroxyphenylpyruvate dioxygenase.	Glutathione-s-transferase theta, gst, putative; Belongs to the GST superfamily.	0.614
RCOM_1192240	RCOM_1743950	B9S300	B9RXB8	4-hydroxyphenylpyruvate dioxygenase.	Homogentisate 1,2-dioxygenase, putative.	0.999
RCOM_1299540	RCOM_0670030	B9S069	B9S3J5	Glutathione-s-transferase theta, gst, putative; Belongs to the GST superfamily.	Fumarylacetoacetase.	0.985
RCOM_1299540	RCOM_1192240	B9S069	B9S300	Glutathione-s-transferase theta, gst, putative; Belongs to the GST superfamily.	4-hydroxyphenylpyruvate dioxygenase.	0.614
RCOM_1299540	RCOM_1612190	B9S069	B9RDD2	Glutathione-s-transferase theta, gst, putative; Belongs to the GST superfamily.	Glutathione-s-transferase theta, gst, putative; Belongs to the GST superfamily.	0.902
RCOM_1299540	RCOM_1743950	B9S069	B9RXB8	Glutathione-s-transferase theta, gst, putative; Belongs to the GST superfamily.	Homogentisate 1,2-dioxygenase, putative.	0.991
RCOM_1612190	RCOM_0670030	B9RDD2	B9S3J5	Glutathione-s-transferase theta, gst, putative; Belongs to the GST superfamily.	Fumarylacetoacetase.	0.985
RCOM_1612190	RCOM_1192240	B9RDD2	B9S300	Glutathione-s-transferase theta, gst, putative; Belongs to the GST superfamily.	4-hydroxyphenylpyruvate dioxygenase.	0.614
RCOM_1612190	RCOM_1299540	B9RDD2	B9S069	Glutathione-s-transferase theta, gst, putative; Belongs to the GST superfamily.	Glutathione-s-transferase theta, gst, putative; Belongs to the GST superfamily.	0.902
RCOM_1612190	RCOM_1743950	B9RDD2	B9RXB8	Glutathione-s-transferase theta, gst, putative; Belongs to the GST superfamily.	Homogentisate 1,2-dioxygenase, putative.	0.991
RCOM_1743950	RCOM_0670030	B9RXB8	B9S3J5	Homogentisate 1,2-dioxygenase, putative.	Fumarylacetoacetase.	0.949
RCOM_1743950	RCOM_1192240	B9RXB8	B9S300	Homogentisate 1,2-dioxygenase, putative.	4-hydroxyphenylpyruvate dioxygenase.	0.999