19 items (Ricinus communis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RCOM_1065770	Androgen induced inhibitor of proliferation (As3) / pds5, putative. (1735 aa)
	RCOM_0261240	TPR_REGION domain-containing protein. (563 aa)
	RCOM_2081500	Uncharacterized protein. (141 aa)
	RCOM_0700100	Uncharacterized protein. (397 aa)
	RCOM_0533470	Uncharacterized protein. (301 aa)
	RCOM_0979280	Uncharacterized protein. (400 aa)
	RCOM_0804080	Tudor domain-containing protein. (1705 aa)
	RCOM_1587050	Uncharacterized protein. (254 aa)
	RCOM_1496480	Uncharacterized protein. (137 aa)
	RCOM_1032140	Androgen induced inhibitor of proliferation (As3) / pds5, putative. (1332 aa)
	RCOM_1053840	Pre-mRNA-splicing factor cwc24, putative. (163 aa)
	RCOM_0921600	Nucleic acid binding protein, putative. (953 aa)
	RCOM_0437770	Uncharacterized protein. (379 aa)
	RCOM_0573510	Structural maintenance of chromosomes protein. (1246 aa)
	RCOM_0470870	Uncharacterized protein. (635 aa)
	RCOM_0470850	Uncharacterized protein. (552 aa)
	RCOM_0658930	Protein binding protein, putative. (396 aa)
	RCOM_0621630	Uncharacterized protein. (193 aa)
	RCOM_0525580	Sister chromatid cohesion protein. (1758 aa)

Your Current Organism:

Ricinus communis

NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCOM_0261240	RCOM_0437770	B9T3W2	B9T2S8	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.726
RCOM_0261240	RCOM_0470850	B9T3W2	B9SMT2	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.654
RCOM_0261240	RCOM_0470870	B9T3W2	B9SMT4	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.654
RCOM_0261240	RCOM_0525580	B9T3W2	B9SJD1	TPR_REGION domain-containing protein.	Sister chromatid cohesion protein.	0.988
RCOM_0261240	RCOM_0533470	B9T3W2	B9S692	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.654
RCOM_0261240	RCOM_0573510	B9T3W2	B9SUJ2	TPR_REGION domain-containing protein.	Structural maintenance of chromosomes protein.	0.904
RCOM_0261240	RCOM_0621630	B9T3W2	B9SHU6	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.654
RCOM_0261240	RCOM_0700100	B9T3W2	B9SBX5	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.654
RCOM_0261240	RCOM_0921600	B9T3W2	B9RNW7	TPR_REGION domain-containing protein.	Nucleic acid binding protein, putative.	0.719
RCOM_0261240	RCOM_0979280	B9T3W2	B9S5M1	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.654
RCOM_0261240	RCOM_1032140	B9T3W2	B9RJ83	TPR_REGION domain-containing protein.	Androgen induced inhibitor of proliferation (As3) / pds5, putative.	0.654
RCOM_0261240	RCOM_1065770	B9T3W2	B9T579	TPR_REGION domain-containing protein.	Androgen induced inhibitor of proliferation (As3) / pds5, putative.	0.654
RCOM_0261240	RCOM_1587050	B9T3W2	B9R6Y9	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.949
RCOM_0261240	RCOM_2081500	B9T3W2	B9T9F1	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.654
RCOM_0437770	RCOM_0261240	B9T2S8	B9T3W2	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.726
RCOM_0437770	RCOM_0470850	B9T2S8	B9SMT2	Uncharacterized protein.	Uncharacterized protein.	0.814
RCOM_0437770	RCOM_0470870	B9T2S8	B9SMT4	Uncharacterized protein.	Uncharacterized protein.	0.814
RCOM_0437770	RCOM_0525580	B9T2S8	B9SJD1	Uncharacterized protein.	Sister chromatid cohesion protein.	0.668
RCOM_0437770	RCOM_0533470	B9T2S8	B9S692	Uncharacterized protein.	Uncharacterized protein.	0.814
RCOM_0437770	RCOM_0573510	B9T2S8	B9SUJ2	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.991