STRINGSTRING
RCOM_1321750 RCOM_1321750 RCOM_0374000 RCOM_0374000 RCOM_0063290 RCOM_0063290 RCOM_0490080 RCOM_0490080 RCOM_0347880 RCOM_0347880 RCOM_0033810 RCOM_0033810 RCOM_0647870 RCOM_0647870 RCOM_0487950 RCOM_0487950 RCOM_0875030 RCOM_0875030 RCOM_0799080 RCOM_0799080 RCOM_1437420 RCOM_1437420 RCOM_1510750 RCOM_1510750 RCOM_1597380 RCOM_1597380
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RCOM_13217503'-5' exonuclease, putative. (857 aa)
RCOM_0374000Exosome complex exonuclease rrp43, putative. (303 aa)
RCOM_0063290Exosome complex exonuclease rrp45, putative. (463 aa)
RCOM_0490080Exosome complex exonuclease RRP41, putative. (241 aa)
RCOM_0347880Exosome complex exonuclease rrp42, putative. (287 aa)
RCOM_0033810Exosome complex exonuclease RRP41, putative. (180 aa)
RCOM_0647870Rrp4, putative. (322 aa)
RCOM_04879503'-5' exonuclease, putative. (977 aa)
RCOM_0875030Mitotic control protein dis3, putative; Belongs to the RNR ribonuclease family. (934 aa)
RCOM_0799080Exosome complex exonuclease RRP46, putative. (211 aa)
RCOM_1437420Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (378 aa)
RCOM_1510750Exosome complex exonuclease RRP40, putative. (234 aa)
RCOM_15973805'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (1113 aa)
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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