(17 nodes) poly(A)+ mRNA export from nucleus network (Ricinus communis)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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Predicted Interactions

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Your Input:
	RCOM_0221100	Nucleic acid binding protein, putative. (530 aa)
	RCOM_0483230	Uncharacterized protein. (1391 aa)
	RCOM_0327250	Uncharacterized protein. (591 aa)
	RCOM_1009960	Uncharacterized protein. (95 aa)
	RCOM_1009950	Uncharacterized protein. (139 aa)
	RCOM_1009920	Uncharacterized protein. (143 aa)
	RCOM_0820170	Uncharacterized protein. (180 aa)
	RCOM_0106670	DUF5311 domain-containing protein. (1464 aa)
	RCOM_1657160	Nuclear pore protein. (710 aa)
	RCOM_1353030	Dead box ATP-dependent RNA helicase, putative. (503 aa)
	RCOM_1128370	Nucleoprotein TPR, putative. (2095 aa)
	RCOM_1083720	Nucleoporin GLE1, putative. (613 aa)
	RCOM_1080550	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (113 aa)
	RCOM_0942390	Uncharacterized protein. (1241 aa)
	RCOM_1046740	PCI domain-containing protein, putative. (412 aa)
	RCOM_1443900	Dead box ATP-dependent RNA helicase, putative. (514 aa)
	RCOM_1677170	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (71 aa)

Your Current Organism:

Ricinus communis

NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCOM_0106670	RCOM_0483230	B9SEW5	B9T0B9	DUF5311 domain-containing protein.	Uncharacterized protein.	0.625
RCOM_0106670	RCOM_0942390	B9SEW5	B9RL20	DUF5311 domain-containing protein.	Uncharacterized protein.	0.970
RCOM_0106670	RCOM_1009920	B9SEW5	B9SNN0	DUF5311 domain-containing protein.	Uncharacterized protein.	0.759
RCOM_0106670	RCOM_1009950	B9SEW5	B9SNN3	DUF5311 domain-containing protein.	Uncharacterized protein.	0.761
RCOM_0106670	RCOM_1009960	B9SEW5	B9SNN4	DUF5311 domain-containing protein.	Uncharacterized protein.	0.682
RCOM_0106670	RCOM_1046740	B9SEW5	B9RK59	DUF5311 domain-containing protein.	PCI domain-containing protein, putative.	0.536
RCOM_0106670	RCOM_1083720	B9SEW5	B9RMT7	DUF5311 domain-containing protein.	Nucleoporin GLE1, putative.	0.882
RCOM_0106670	RCOM_1128370	B9SEW5	B9RYK2	DUF5311 domain-containing protein.	Nucleoprotein TPR, putative.	0.682
RCOM_0106670	RCOM_1353030	B9SEW5	B9S0B8	DUF5311 domain-containing protein.	Dead box ATP-dependent RNA helicase, putative.	0.574
RCOM_0106670	RCOM_1443900	B9SEW5	B9RGT5	DUF5311 domain-containing protein.	Dead box ATP-dependent RNA helicase, putative.	0.409
RCOM_0106670	RCOM_1657160	B9SEW5	B9S1E0	DUF5311 domain-containing protein.	Nuclear pore protein.	0.986
RCOM_0221100	RCOM_0820170	B9SEP4	B9SGT8	Nucleic acid binding protein, putative.	Uncharacterized protein.	0.835
RCOM_0327250	RCOM_0820170	B9SW62	B9SGT8	Uncharacterized protein.	Uncharacterized protein.	0.835
RCOM_0483230	RCOM_0106670	B9T0B9	B9SEW5	Uncharacterized protein.	DUF5311 domain-containing protein.	0.625
RCOM_0483230	RCOM_0942390	B9T0B9	B9RL20	Uncharacterized protein.	Uncharacterized protein.	0.485
RCOM_0820170	RCOM_0221100	B9SGT8	B9SEP4	Uncharacterized protein.	Nucleic acid binding protein, putative.	0.835
RCOM_0820170	RCOM_0327250	B9SGT8	B9SW62	Uncharacterized protein.	Uncharacterized protein.	0.835
RCOM_0820170	RCOM_1046740	B9SGT8	B9RK59	Uncharacterized protein.	PCI domain-containing protein, putative.	0.515
RCOM_0820170	RCOM_1080550	B9SGT8	B9RMF3	Uncharacterized protein.	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	0.518
RCOM_0820170	RCOM_1677170	B9SGT8	B9RBI3	Uncharacterized protein.	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	0.518