38 items (Ricinus communis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RCOM_1205220	Plant mitotic spindle assembly checkpoint protein mad2, putative. (55 aa)
	RCOM_1602300	Bubr1, putative. (380 aa)
	RCOM_1512770	Cell division cycle, putative. (577 aa)
	RCOM_1513760	Nuclear protein zap, putative. (676 aa)
	RCOM_1508840	Uncharacterized protein. (99 aa)
	RCOM_1622080	Initiation factor 5a, putative. (509 aa)
	RCOM_1434160	Uncharacterized protein. (125 aa)
	RCOM_1436820	Ring finger, putative. (127 aa)
	RCOM_1438760	DNA helicase; Belongs to the MCM family. (930 aa)
	RCOM_1578930	Ubiquitin-conjugating enzyme E2 C, putative; Belongs to the ubiquitin-conjugating enzyme family. (179 aa)
	RCOM_1032370	Dual specificity protein kinase-ttk, putative. (832 aa)
	RCOM_1050320	Cell division cycle, putative. (751 aa)
	RCOM_1081200	Plant mitotic spindle assembly checkpoint protein mad2, putative. (207 aa)
	RCOM_0680300	Anaphase promoting complex subunit, putative. (558 aa)
	RCOM_1173500	Mitotic checkpoint serine/threonine-protein kinase bub1 and bubr1, putative. (586 aa)
	RCOM_0935660	WAPL domain-containing protein. (905 aa)
	RCOM_1003800	Telo_bind domain-containing protein. (460 aa)
	RCOM_0837560	E3 ubiquitin ligase apc2, putative; Belongs to the cullin family. (883 aa)
	RCOM_0891870	Cell division cycle, putative. (655 aa)
	RCOM_1095800	Anaphase-promoting complex subunit, putative. (763 aa)
	RCOM_1185630	Uncharacterized protein. (103 aa)
	RCOM_0175090	Mitotic checkpoint protein bub3, putative. (342 aa)
	RCOM_0496470	Spindle assembly checkpoint component mad1, putative. (728 aa)
	RCOM_0980890	Regulator of telomere elongation helicase 1 rtel1, putative. (1049 aa)
	RCOM_0838250	Meiotic checkpoint regulator cut4, putative. (1703 aa)
	RCOM_0839760	BUB1 N-terminal domain-containing protein. (533 aa)
	RCOM_0511540	Uncharacterized protein. (645 aa)
	RCOM_0511550	Uncharacterized protein. (97 aa)
	RCOM_0984660	D-alanyl-d-alanine carboxypeptidase, putative. (370 aa)
	RCOM_0981300	Cell division cycle, putative. (469 aa)
	RCOM_0981410	Uncharacterized protein. (170 aa)
	RCOM_1097680	Plant mitotic spindle assembly checkpoint protein mad2, putative. (67 aa)
	RCOM_1360350	Plant mitotic spindle assembly checkpoint protein mad2, putative. (87 aa)
	RCOM_0437770	Uncharacterized protein. (379 aa)
	RCOM_1123640	ANAPC5 domain-containing protein. (917 aa)
	RCOM_1264030	Nfrkb, putative. (1410 aa)
	RCOM_0332780	Ubiquitin-conjugating enzyme E2 C, putative; Belongs to the ubiquitin-conjugating enzyme family. (188 aa)
	RCOM_0052530	DNA binding protein, putative. (698 aa)

Your Current Organism:

Ricinus communis

NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCOM_0175090	RCOM_0332780	B9SND5	B9T4S8	Mitotic checkpoint protein bub3, putative.	Ubiquitin-conjugating enzyme E2 C, putative; Belongs to the ubiquitin-conjugating enzyme family.	0.724
RCOM_0175090	RCOM_0496470	B9SND5	B9SPB2	Mitotic checkpoint protein bub3, putative.	Spindle assembly checkpoint component mad1, putative.	0.914
RCOM_0175090	RCOM_0511540	B9SND5	B9SSJ2	Mitotic checkpoint protein bub3, putative.	Uncharacterized protein.	0.731
RCOM_0175090	RCOM_0511550	B9SND5	B9SSJ3	Mitotic checkpoint protein bub3, putative.	Uncharacterized protein.	0.731
RCOM_0175090	RCOM_0680300	B9SND5	B9RT16	Mitotic checkpoint protein bub3, putative.	Anaphase promoting complex subunit, putative.	0.666
RCOM_0175090	RCOM_0837560	B9SND5	B9S900	Mitotic checkpoint protein bub3, putative.	E3 ubiquitin ligase apc2, putative; Belongs to the cullin family.	0.675
RCOM_0175090	RCOM_0838250	B9SND5	B9SQN9	Mitotic checkpoint protein bub3, putative.	Meiotic checkpoint regulator cut4, putative.	0.845
RCOM_0175090	RCOM_0839760	B9SND5	B9SQQ9	Mitotic checkpoint protein bub3, putative.	BUB1 N-terminal domain-containing protein.	0.939
RCOM_0175090	RCOM_0891870	B9SND5	B9SCC8	Mitotic checkpoint protein bub3, putative.	Cell division cycle, putative.	0.799
RCOM_0175090	RCOM_0981300	B9SND5	B9SVY0	Mitotic checkpoint protein bub3, putative.	Cell division cycle, putative.	0.799
RCOM_0175090	RCOM_0981410	B9SND5	B9SVY1	Mitotic checkpoint protein bub3, putative.	Uncharacterized protein.	0.799
RCOM_0175090	RCOM_1032370	B9SND5	B9RJ96	Mitotic checkpoint protein bub3, putative.	Dual specificity protein kinase-ttk, putative.	0.602
RCOM_0175090	RCOM_1050320	B9SND5	B9RKJ5	Mitotic checkpoint protein bub3, putative.	Cell division cycle, putative.	0.933
RCOM_0175090	RCOM_1081200	B9SND5	B9RMJ8	Mitotic checkpoint protein bub3, putative.	Plant mitotic spindle assembly checkpoint protein mad2, putative.	0.909
RCOM_0175090	RCOM_1095800	B9SND5	B9SFA8	Mitotic checkpoint protein bub3, putative.	Anaphase-promoting complex subunit, putative.	0.958
RCOM_0175090	RCOM_1097680	B9SND5	B9T0S1	Mitotic checkpoint protein bub3, putative.	Plant mitotic spindle assembly checkpoint protein mad2, putative.	0.909
RCOM_0175090	RCOM_1123640	B9SND5	B9T3H3	Mitotic checkpoint protein bub3, putative.	ANAPC5 domain-containing protein.	0.917
RCOM_0175090	RCOM_1173500	B9SND5	B9RVW6	Mitotic checkpoint protein bub3, putative.	Mitotic checkpoint serine/threonine-protein kinase bub1 and bubr1, putative.	0.938
RCOM_0175090	RCOM_1205220	B9SND5	B9SWE8	Mitotic checkpoint protein bub3, putative.	Plant mitotic spindle assembly checkpoint protein mad2, putative.	0.909
RCOM_0175090	RCOM_1360350	B9SND5	B9T1E2	Mitotic checkpoint protein bub3, putative.	Plant mitotic spindle assembly checkpoint protein mad2, putative.	0.909