STRINGSTRING
RCOM_1602530 RCOM_1602530 RCOM_1510750 RCOM_1510750 RCOM_1031510 RCOM_1031510 RCOM_0799080 RCOM_0799080 RCOM_0730930 RCOM_0730930 RCOM_0647870 RCOM_0647870 RCOM_0033810 RCOM_0033810 RCOM_0347880 RCOM_0347880 RCOM_0490080 RCOM_0490080 RCOM_0063290 RCOM_0063290 RCOM_0374000 RCOM_0374000
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RCOM_1602530O-linked n-acetylglucosamine transferase, ogt, putative. (1236 aa)
RCOM_1510750Exosome complex exonuclease RRP40, putative. (234 aa)
RCOM_1031510DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1099 aa)
RCOM_0799080Exosome complex exonuclease RRP46, putative. (211 aa)
RCOM_0730930Helicase, putative. (1335 aa)
RCOM_0647870Rrp4, putative. (322 aa)
RCOM_0033810Exosome complex exonuclease RRP41, putative. (180 aa)
RCOM_0347880Exosome complex exonuclease rrp42, putative. (287 aa)
RCOM_0490080Exosome complex exonuclease RRP41, putative. (241 aa)
RCOM_0063290Exosome complex exonuclease rrp45, putative. (463 aa)
RCOM_0374000Exosome complex exonuclease rrp43, putative. (303 aa)
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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