(33 nodes) Cellular response to heat network (Ricinus communis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RCOM_0990350	DNA binding protein, putative. (360 aa)
	RCOM_1326840	Heat shock factor protein HSF8, putative. (494 aa)
	RCOM_0814100	Nuclear acid binding protein, putative. (438 aa)
	RCOM_0900590	Uncharacterized protein. (279 aa)
	RCOM_0911060	Heat shock factor protein HSF30, putative. (359 aa)
	RCOM_0911040	Early light-induced protein, putative. (191 aa)
	RCOM_0680930	Uncharacterized protein. (64 aa)
	RCOM_1591740	Nuclear acid binding protein, putative. (443 aa)
	RCOM_1602310	CP12 domain-containing protein. (142 aa)
	RCOM_1503040	Ribonuclease; Cytoprotective ribonuclease (RNase) required for resistance to abiotic stresses, acting as a positive regulator of mRNA decapping during stress. (988 aa)
	RCOM_1679700	Heat shock protein 70 (HSP70)-interacting protein, putative. (578 aa)
	RCOM_1688100	Heat shock protein, putative. (703 aa)
	RCOM_1428570	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (964 aa)
	RCOM_1577640	Nuclear acid binding protein, putative. (412 aa)
	RCOM_0705960	Heat shock factor protein HSF30, putative. (371 aa)
	RCOM_0921740	Chaperone clpb, putative; Belongs to the ClpA/ClpB family. (976 aa)
	RCOM_1469930	Chaperone clpb, putative; Belongs to the ClpA/ClpB family. (912 aa)
	RCOM_1053010	DNA binding protein, putative. (337 aa)
	RCOM_1047180	Heat shock factor protein HSF30, putative. (478 aa)
	RCOM_1582180	Heat shock protein, putative. (703 aa)
	RCOM_0406360	ClpB_D2-small domain-containing protein. (64 aa)
	RCOM_0104810	Heat shock protein, putative. (698 aa)
	RCOM_1439840	Uncharacterized protein. (72 aa)
	RCOM_0845250	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. (356 aa)
	RCOM_0383000	DNA binding protein, putative. (521 aa)
	RCOM_1278140	Heat shock factor protein HSF8, putative. (510 aa)
	RCOM_1148470	Heat shock factor protein, putative. (409 aa)
	RCOM_0524340	Chaperone clpb, putative; Belongs to the ClpA/ClpB family. (973 aa)
	RCOM_0539820	Heat shock factor protein, putative. (464 aa)
	RCOM_0523380	DNA binding protein, putative. (491 aa)
	RCOM_1252030	Heat shock factor protein, putative. (402 aa)
	RCOM_0610380	DNA-directed RNA polymerase II, putative. (138 aa)
	RCOM_1326950	HSF_DOMAIN domain-containing protein. (84 aa)

Your Current Organism:

Ricinus communis

NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCOM_0104810	RCOM_0383000	B9T1Q8	B9SRG8	Heat shock protein, putative.	DNA binding protein, putative.	0.461
RCOM_0104810	RCOM_0406360	B9T1Q8	B9T9G9	Heat shock protein, putative.	ClpB_D2-small domain-containing protein.	0.479
RCOM_0104810	RCOM_0524340	B9T1Q8	B9SJA7	Heat shock protein, putative.	Chaperone clpb, putative; Belongs to the ClpA/ClpB family.	0.479
RCOM_0104810	RCOM_0680930	B9T1Q8	B9RT48	Heat shock protein, putative.	Uncharacterized protein.	0.442
RCOM_0104810	RCOM_0705960	B9T1Q8	B9RQR4	Heat shock protein, putative.	Heat shock factor protein HSF30, putative.	0.539
RCOM_0104810	RCOM_0845250	B9T1Q8	B9SY85	Heat shock protein, putative.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.507
RCOM_0104810	RCOM_0990350	B9T1Q8	B9S4N6	Heat shock protein, putative.	DNA binding protein, putative.	0.407
RCOM_0104810	RCOM_1278140	B9T1Q8	B9SNT1	Heat shock protein, putative.	Heat shock factor protein HSF8, putative.	0.419
RCOM_0104810	RCOM_1326840	B9T1Q8	B9S232	Heat shock protein, putative.	Heat shock factor protein HSF8, putative.	0.419
RCOM_0104810	RCOM_1326950	B9T1Q8	B9S233	Heat shock protein, putative.	HSF_DOMAIN domain-containing protein.	0.419
RCOM_0104810	RCOM_1439840	B9T1Q8	B9T0W0	Heat shock protein, putative.	Uncharacterized protein.	0.442
RCOM_0104810	RCOM_1469930	B9T1Q8	B9RLP7	Heat shock protein, putative.	Chaperone clpb, putative; Belongs to the ClpA/ClpB family.	0.453
RCOM_0104810	RCOM_1582180	B9T1Q8	B9RIT0	Heat shock protein, putative.	Heat shock protein, putative.	0.900
RCOM_0104810	RCOM_1679700	B9T1Q8	B9RBP6	Heat shock protein, putative.	Heat shock protein 70 (HSP70)-interacting protein, putative.	0.803
RCOM_0104810	RCOM_1688100	B9T1Q8	B9RCG8	Heat shock protein, putative.	Heat shock protein, putative.	0.901
RCOM_0383000	RCOM_0104810	B9SRG8	B9T1Q8	DNA binding protein, putative.	Heat shock protein, putative.	0.461
RCOM_0383000	RCOM_1469930	B9SRG8	B9RLP7	DNA binding protein, putative.	Chaperone clpb, putative; Belongs to the ClpA/ClpB family.	0.422
RCOM_0383000	RCOM_1582180	B9SRG8	B9RIT0	DNA binding protein, putative.	Heat shock protein, putative.	0.461
RCOM_0383000	RCOM_1688100	B9SRG8	B9RCG8	DNA binding protein, putative.	Heat shock protein, putative.	0.461
RCOM_0406360	RCOM_0104810	B9T9G9	B9T1Q8	ClpB_D2-small domain-containing protein.	Heat shock protein, putative.	0.479