(50 nodes) Nutrient reservoir activity network (Ricinus communis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RCOM_1591320	Uncharacterized protein. (107 aa)
	RCOM_1591330	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (407 aa)
	RCOM_1591450	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (407 aa)
	RCOM_1591460	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (411 aa)
	RCOM_1591470	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (405 aa)
	RCOM_1591480	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (405 aa)
	RCOM_1596210	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (810 aa)
	RCOM_1449140	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (814 aa)
	RCOM_1048880	Acid phosphatase 1, putative. (251 aa)
	RCOM_1345910	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (419 aa)
	RCOM_1547790	2S sulfur-rich seed storage protein large subunit, putative. (178 aa)
	RCOM_1487980	Stem 28 kDa glycoprotein, putative. (258 aa)
	RCOM_0911540	Vicilin GC72-A, putative. (613 aa)
	RCOM_0601950	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (206 aa)
	RCOM_0601960	Uncharacterized protein. (144 aa)
	RCOM_0521200	Uncharacterized protein. (111 aa)
	RCOM_0521210	11S globulin subunit beta, putative; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family. (386 aa)
	RCOM_0183740	2S albumin, putative. (152 aa)
	RCOM_0183750	2S albumin, putative. (172 aa)
	RCOM_0183870	Uncharacterized protein. (155 aa)
	RCOM_0183980	2S albumin, putative. (179 aa)
	RCOM_0183990	2S albumin, putative. (258 aa)
	RCOM_0184110	Sweet protein mabinlin-1, chain B. (258 aa)
	RCOM_0184130	2S sulfur-rich seed storage protein large subunit, putative. (147 aa)
	RCOM_0586980	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (341 aa)
	RCOM_0700620	Apolipoprotein d, putative; Belongs to the calycin superfamily. Lipocalin family. (187 aa)
	RCOM_1407190	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (405 aa)
	RCOM_1407210	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (398 aa)
	RCOM_1407220	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (404 aa)
	RCOM_0488320	Legumin B, putative. (476 aa)
	RCOM_1213560	Legumin A, putative; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family. (475 aa)
	RCOM_1213570	Legumin A, putative; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family. (508 aa)
	RCOM_1213580	Legumin A, putative; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family. (478 aa)
	RCOM_0646490	Nucleolar protein nop56, putative. (560 aa)
	RCOM_0658540	Nutrient reservoir, putative. (360 aa)
	RCOM_0542930	Acid phosphatase 1, putative. (272 aa)
	RCOM_1217820	Uncharacterized protein. (57 aa)
	RCOM_0663200	Uncharacterized protein; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family. (117 aa)
	RCOM_0663220	11S globulin subunit beta, putative. (480 aa)
	RCOM_0787750	Nutrient reservoir, putative. (356 aa)
	RCOM_0787760	Nutrient reservoir, putative. (358 aa)
	RCOM_0126240	Acid phosphatase 1, putative. (260 aa)
	RCOM_0499120	Legumin A, putative; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family. (461 aa)
	RCOM_0176330	Nutrient reservoir, putative. (356 aa)
	RCOM_0400470	Glutelin type-A 3, putative; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family. (497 aa)
	RCOM_0252660	Uncharacterized protein. (343 aa)
	RCOM_0357150	Cupin type-1 domain-containing protein. (67 aa)
	RCOM_1817950	Outer membrane lipoprotein blc, putative. (149 aa)
	RCOM_2131030	Cupin type-1 domain-containing protein. (193 aa)
	RCOM_0488460	Legumin-like protein. (476 aa)

Your Current Organism:

Ricinus communis

NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCOM_0126240	RCOM_1449140	B9T0N4	B9RHA6	Acid phosphatase 1, putative.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.937
RCOM_0126240	RCOM_1596210	B9T0N4	B9R827	Acid phosphatase 1, putative.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.937
RCOM_0183870	RCOM_0184130	B9SA31	B9SA37	Uncharacterized protein.	2S sulfur-rich seed storage protein large subunit, putative.	0.655
RCOM_0183870	RCOM_0488460	B9SA31	Q9M4Q8	Uncharacterized protein.	Legumin-like protein.	0.673
RCOM_0183870	RCOM_1547790	B9SA31	B9RPN9	Uncharacterized protein.	2S sulfur-rich seed storage protein large subunit, putative.	0.655
RCOM_0184110	RCOM_0488460	B9SA35	Q9M4Q8	Sweet protein mabinlin-1, chain B.	Legumin-like protein.	0.657
RCOM_0184110	RCOM_1213560	B9SA35	B9SF35	Sweet protein mabinlin-1, chain B.	Legumin A, putative; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family.	0.407
RCOM_0184110	RCOM_2131030	B9SA35	B9TNE2	Sweet protein mabinlin-1, chain B.	Cupin type-1 domain-containing protein.	0.407
RCOM_0184130	RCOM_0183870	B9SA37	B9SA31	2S sulfur-rich seed storage protein large subunit, putative.	Uncharacterized protein.	0.655
RCOM_0400470	RCOM_0646490	B9T5E7	B9SFI3	Glutelin type-A 3, putative; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family.	Nucleolar protein nop56, putative.	0.456
RCOM_0400470	RCOM_0911540	B9T5E7	B9RTM9	Glutelin type-A 3, putative; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family.	Vicilin GC72-A, putative.	0.447
RCOM_0488460	RCOM_0183870	Q9M4Q8	B9SA31	Legumin-like protein.	Uncharacterized protein.	0.673
RCOM_0488460	RCOM_0184110	Q9M4Q8	B9SA35	Legumin-like protein.	Sweet protein mabinlin-1, chain B.	0.657
RCOM_0521200	RCOM_0521210	B9S9Q6	B9S9Q7	Uncharacterized protein.	11S globulin subunit beta, putative; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family.	0.515
RCOM_0521200	RCOM_0658540	B9S9Q6	B9SKF4	Uncharacterized protein.	Nutrient reservoir, putative.	0.512
RCOM_0521200	RCOM_0663200	B9S9Q6	B9SW14	Uncharacterized protein.	Uncharacterized protein; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family.	0.542
RCOM_0521210	RCOM_0521200	B9S9Q7	B9S9Q6	11S globulin subunit beta, putative; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family.	Uncharacterized protein.	0.515
RCOM_0586980	RCOM_0700620	B9SAI0	B9SBY6	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	Apolipoprotein d, putative; Belongs to the calycin superfamily. Lipocalin family.	0.511
RCOM_0586980	RCOM_1817950	B9SAI0	B9TE65	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	Outer membrane lipoprotein blc, putative.	0.511
RCOM_0646490	RCOM_0400470	B9SFI3	B9T5E7	Nucleolar protein nop56, putative.	Glutelin type-A 3, putative; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family.	0.456