(23 nodes) Protein stabilization network (Ricinus communis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RCOM_1502600	Uncharacterized protein. (313 aa)
	RCOM_1684010	Protein binding protein, putative. (301 aa)
	RCOM_1688100	Heat shock protein, putative. (703 aa)
	RCOM_1599590	DNL-type domain-containing protein. (209 aa)
	RCOM_1600210	Phosphoprotein ECPP44, putative; Belongs to the plant dehydrin family. (230 aa)
	RCOM_1689140	Chaperone binding protein, putative. (262 aa)
	RCOM_1435660	Xaa-pro dipeptidase, putative. (487 aa)
	RCOM_1581910	Chaperone binding protein, putative. (361 aa)
	RCOM_1582180	Heat shock protein, putative. (703 aa)
	RCOM_1474450	Protein binding protein, putative. (265 aa)
	RCOM_1000610	Uncharacterized protein. (111 aa)
	RCOM_1722960	Uncharacterized protein. (1384 aa)
	RCOM_1282690	Ubiquinone biosynthesis protein coq-8, putative. (528 aa)
	RCOM_0751130	GTP-binding protein typa/bipa, putative. (703 aa)
	RCOM_0293420	Uncharacterized protein. (307 aa)
	RCOM_0488800	Protein binding protein, putative. (152 aa)
	RCOM_0481360	DNL-type domain-containing protein. (199 aa)
	RCOM_0845250	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. (356 aa)
	RCOM_1288540	Ubiquitin-like domain-containing protein. (296 aa)
	RCOM_0302140	Photosystem I reaction center subunit V, chloroplast, putative. (160 aa)
	RCOM_1497090	Protein binding protein, putative. (353 aa)
	RCOM_0104810	Heat shock protein, putative. (698 aa)
	psbH	Photosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (73 aa)

Your Current Organism:

Ricinus communis

NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCOM_0104810	RCOM_0845250	B9T1Q8	B9SY85	Heat shock protein, putative.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.507
RCOM_0104810	RCOM_1581910	B9T1Q8	B9RIR3	Heat shock protein, putative.	Chaperone binding protein, putative.	0.997
RCOM_0104810	RCOM_1582180	B9T1Q8	B9RIT0	Heat shock protein, putative.	Heat shock protein, putative.	0.900
RCOM_0104810	RCOM_1688100	B9T1Q8	B9RCG8	Heat shock protein, putative.	Heat shock protein, putative.	0.901
RCOM_0104810	RCOM_1689140	B9T1Q8	B9RCI2	Heat shock protein, putative.	Chaperone binding protein, putative.	0.989
RCOM_0293420	RCOM_0302140	B9SWH3	B9T0J8	Uncharacterized protein.	Photosystem I reaction center subunit V, chloroplast, putative.	0.432
RCOM_0302140	RCOM_0293420	B9T0J8	B9SWH3	Photosystem I reaction center subunit V, chloroplast, putative.	Uncharacterized protein.	0.432
RCOM_0302140	psbH	B9T0J8	G1D787	Photosystem I reaction center subunit V, chloroplast, putative.	Photosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.	0.604
RCOM_0845250	RCOM_0104810	B9SY85	B9T1Q8	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	Heat shock protein, putative.	0.507
RCOM_0845250	RCOM_1582180	B9SY85	B9RIT0	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	Heat shock protein, putative.	0.507
RCOM_0845250	RCOM_1688100	B9SY85	B9RCG8	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	Heat shock protein, putative.	0.507
RCOM_1581910	RCOM_0104810	B9RIR3	B9T1Q8	Chaperone binding protein, putative.	Heat shock protein, putative.	0.997
RCOM_1581910	RCOM_1582180	B9RIR3	B9RIT0	Chaperone binding protein, putative.	Heat shock protein, putative.	0.997
RCOM_1581910	RCOM_1688100	B9RIR3	B9RCG8	Chaperone binding protein, putative.	Heat shock protein, putative.	0.997
RCOM_1582180	RCOM_0104810	B9RIT0	B9T1Q8	Heat shock protein, putative.	Heat shock protein, putative.	0.900
RCOM_1582180	RCOM_0845250	B9RIT0	B9SY85	Heat shock protein, putative.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.507
RCOM_1582180	RCOM_1581910	B9RIT0	B9RIR3	Heat shock protein, putative.	Chaperone binding protein, putative.	0.997
RCOM_1582180	RCOM_1688100	B9RIT0	B9RCG8	Heat shock protein, putative.	Heat shock protein, putative.	0.900
RCOM_1582180	RCOM_1689140	B9RIT0	B9RCI2	Heat shock protein, putative.	Chaperone binding protein, putative.	0.989
RCOM_1688100	RCOM_0104810	B9RCG8	B9T1Q8	Heat shock protein, putative.	Heat shock protein, putative.	0.901