STRINGSTRING
RCOM_0993080 RCOM_0993080 RCOM_1095710 RCOM_1095710 RCOM_0647870 RCOM_0647870 RCOM_1321070 RCOM_1321070 RCOM_1597380 RCOM_1597380 RCOM_1321750 RCOM_1321750 RCOM_1627130 RCOM_1627130 RCOM_0470900 RCOM_0470900 RCOM_0623210 RCOM_0623210 RCOM_1264730 RCOM_1264730 RCOM_0225810 RCOM_0225810 RCOM_0347880 RCOM_0347880 RCOM_0265760 RCOM_0265760 RCOM_0063290 RCOM_0063290 RCOM_0041430 RCOM_0041430 RCOM_0374000 RCOM_0374000 RCOM_0444530 RCOM_0444530 RCOM_0199720 RCOM_0199720 RCOM_0313610 RCOM_0313610 RCOM_1502620 RCOM_1502620 RCOM_1510750 RCOM_1510750 RCOM_1617470 RCOM_1617470 RCOM_1428570 RCOM_1428570 RCOM_1031510 RCOM_1031510 RCOM_1053860 RCOM_1053860 RCOM_1341420 RCOM_1341420 RCOM_0921770 RCOM_0921770 RCOM_1378060 RCOM_1378060 RCOM_1243340 RCOM_1243340 RCOM_0866780 RCOM_0866780 RCOM_1323640 RCOM_1323640 RCOM_0757190 RCOM_0757190 RCOM_0875030 RCOM_0875030 RCOM_0522460 RCOM_0522460 RCOM_0650270 RCOM_0650270 RCOM_1282470 RCOM_1282470 RCOM_1282650 RCOM_1282650 RCOM_0487950 RCOM_0487950
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RCOM_0993080Ccr4-associated factor, putative. (161 aa)
RCOM_1095710Polyribonucleotide nucleotidyltransferase, putative. (958 aa)
RCOM_0647870Rrp4, putative. (322 aa)
RCOM_1321070Polyribonucleotide nucleotidyltransferase, putative. (948 aa)
RCOM_15973805'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (1113 aa)
RCOM_13217503'-5' exonuclease, putative. (857 aa)
RCOM_1627130Ribonuclease, putative. (624 aa)
RCOM_0470900Ccr4-associated factor, putative. (274 aa)
RCOM_0623210Uncharacterized protein. (258 aa)
RCOM_1264730Exonuclease domain-containing protein. (409 aa)
RCOM_0225810Ccr4-associated factor, putative. (292 aa)
RCOM_0347880Exosome complex exonuclease rrp42, putative. (287 aa)
RCOM_0265760POLIIIAc domain-containing protein. (302 aa)
RCOM_0063290Exosome complex exonuclease rrp45, putative. (463 aa)
RCOM_0041430Carbon catabolite repressor protein, putative. (603 aa)
RCOM_0374000Exosome complex exonuclease rrp43, putative. (303 aa)
RCOM_0444530Ccr4-associated factor, putative. (294 aa)
RCOM_0199720Endo/exonuclease/phosphatase domain-containing protein. (447 aa)
RCOM_0313610Ribonuclease II, putative. (731 aa)
RCOM_1502620U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family. (288 aa)
RCOM_1510750Exosome complex exonuclease RRP40, putative. (234 aa)
RCOM_1617470Endo/exonuclease/phosphatase domain-containing protein. (440 aa)
RCOM_14285705'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (964 aa)
RCOM_1031510DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1099 aa)
RCOM_1053860Endo/exonuclease/phosphatase domain-containing protein. (809 aa)
RCOM_1341420Carbon catabolite repressor protein, putative. (471 aa)
RCOM_0921770Ccr4-associated factor, putative. (274 aa)
RCOM_1378060Oligoribonuclease, mitochondrial, putative. (232 aa)
RCOM_1243340Protein dom-3, putative. (528 aa)
RCOM_0866780RNA exonuclease NGL1, putative. (443 aa)
RCOM_13236405'->3' exoribonuclease, putative. (1545 aa)
RCOM_0757190Carbon catabolite repressor protein, putative. (456 aa)
RCOM_0875030Mitotic control protein dis3, putative; Belongs to the RNR ribonuclease family. (934 aa)
RCOM_0522460Uncharacterized protein. (699 aa)
RCOM_0650270Exonuclease, putative. (329 aa)
RCOM_1282470Ccr4-associated factor, putative. (281 aa)
RCOM_12826505'->3' exoribonuclease, putative. (993 aa)
RCOM_04879503'-5' exonuclease, putative. (977 aa)
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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