STRINGSTRING
RCOM_0001270 RCOM_0001270 RCOM_0803100 RCOM_0803100 RCOM_1137840 RCOM_1137840 RCOM_1369180 RCOM_1369180 RCOM_1563770 RCOM_1563770 RCOM_1048810 RCOM_1048810 RCOM_1039350 RCOM_1039350 RCOM_1039340 RCOM_1039340 RCOM_1033150 RCOM_1033150 RCOM_1435740 RCOM_1435740 RCOM_1595530 RCOM_1595530 RCOM_0678700 RCOM_0678700 RCOM_0867610 RCOM_0867610 RCOM_0993500 RCOM_0993500 RCOM_0185260 RCOM_0185260 RCOM_0726280 RCOM_0726280 RCOM_1186100 RCOM_1186100
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RCOM_0001270AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1121 aa)
RCOM_0803100Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. (848 aa)
RCOM_1137840Uncharacterized protein. (1113 aa)
RCOM_1369180AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (153 aa)
RCOM_1563770AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (161 aa)
RCOM_1048810AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (143 aa)
RCOM_1039350Uncharacterized protein. (63 aa)
RCOM_1039340AP-4 complex subunit mu-1, putative; Belongs to the adaptor complexes medium subunit family. (421 aa)
RCOM_1033150Eukaryotic translation initiation factor, putative. (447 aa)
RCOM_1435740Clathrin coat adaptor ap3 medium chain, putative; Belongs to the adaptor complexes medium subunit family. (415 aa)
RCOM_1595530AP-4 complex subunit mu-1, putative; Belongs to the adaptor complexes medium subunit family. (472 aa)
RCOM_0678700MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (632 aa)
RCOM_0867610AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family. (981 aa)
RCOM_0993500AP-1 complex subunit gamma. (875 aa)
RCOM_0185260Uncharacterized protein. (523 aa)
RCOM_0726280Uncharacterized protein. (848 aa)
RCOM_1186100AP-2 complex subunit alpha; Subunit of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. (1018 aa)
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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