(14 nodes) GHMP kinase, C-terminal domain superfamily network (Ricinus communis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RCOM_1563630	Galactokinase, putative. (431 aa)
	RCOM_2070380	Galactokinase, putative. (295 aa)
	RCOM_2045220	Uncharacterized protein. (206 aa)
	RCOM_0573350	Mevalonate kinase. (386 aa)
	RCOM_0205340	Galactokinase, putative. (978 aa)
	RCOM_0716030	ATP binding protein, putative. (873 aa)
	RCOM_0784670	4-diphosphocytidyl-2-C-methyl-d-erythritol kinase, putative. (388 aa)
	RCOM_1065080	ATP binding protein, putative. (354 aa)
	RCOM_0888230	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family. (415 aa)
	RCOM_0699810	ATP binding protein, putative. (503 aa)
	RCOM_1001220	Galactokinase, putative. (499 aa)
	RCOM_0902180	Homoserine kinase, putative. (367 aa)
	RCOM_1431350	Mevalonate kinase. (386 aa)
	RCOM_0902140	GHMP_kinases_C domain-containing protein. (76 aa)

Your Current Organism:

Ricinus communis

NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCOM_0205340	RCOM_1065080	B9SPS4	B9S667	Galactokinase, putative.	ATP binding protein, putative.	0.833
RCOM_0573350	RCOM_0699810	B9SUI6	B9S2I7	Mevalonate kinase.	ATP binding protein, putative.	0.986
RCOM_0573350	RCOM_0784670	B9SUI6	B9SB47	Mevalonate kinase.	4-diphosphocytidyl-2-C-methyl-d-erythritol kinase, putative.	0.789
RCOM_0573350	RCOM_0888230	B9SUI6	B9S5A3	Mevalonate kinase.	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.	0.996
RCOM_0573350	RCOM_0902140	B9SUI6	B9RVC5	Mevalonate kinase.	GHMP_kinases_C domain-containing protein.	0.485
RCOM_0573350	RCOM_0902180	B9SUI6	B9RVC9	Mevalonate kinase.	Homoserine kinase, putative.	0.485
RCOM_0573350	RCOM_1431350	B9SUI6	B9RF46	Mevalonate kinase.	Mevalonate kinase.	0.900
RCOM_0573350	RCOM_2045220	B9SUI6	B9TM04	Mevalonate kinase.	Uncharacterized protein.	0.418
RCOM_0699810	RCOM_0573350	B9S2I7	B9SUI6	ATP binding protein, putative.	Mevalonate kinase.	0.986
RCOM_0699810	RCOM_0784670	B9S2I7	B9SB47	ATP binding protein, putative.	4-diphosphocytidyl-2-C-methyl-d-erythritol kinase, putative.	0.719
RCOM_0699810	RCOM_0888230	B9S2I7	B9S5A3	ATP binding protein, putative.	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.	0.993
RCOM_0699810	RCOM_0902140	B9S2I7	B9RVC5	ATP binding protein, putative.	GHMP_kinases_C domain-containing protein.	0.422
RCOM_0699810	RCOM_0902180	B9S2I7	B9RVC9	ATP binding protein, putative.	Homoserine kinase, putative.	0.422
RCOM_0699810	RCOM_1431350	B9S2I7	B9RF46	ATP binding protein, putative.	Mevalonate kinase.	0.986
RCOM_0699810	RCOM_2045220	B9S2I7	B9TM04	ATP binding protein, putative.	Uncharacterized protein.	0.526
RCOM_0784670	RCOM_0573350	B9SB47	B9SUI6	4-diphosphocytidyl-2-C-methyl-d-erythritol kinase, putative.	Mevalonate kinase.	0.789
RCOM_0784670	RCOM_0699810	B9SB47	B9S2I7	4-diphosphocytidyl-2-C-methyl-d-erythritol kinase, putative.	ATP binding protein, putative.	0.719
RCOM_0784670	RCOM_0888230	B9SB47	B9S5A3	4-diphosphocytidyl-2-C-methyl-d-erythritol kinase, putative.	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.	0.526
RCOM_0784670	RCOM_1431350	B9SB47	B9RF46	4-diphosphocytidyl-2-C-methyl-d-erythritol kinase, putative.	Mevalonate kinase.	0.789
RCOM_0888230	RCOM_0573350	B9S5A3	B9SUI6	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.	Mevalonate kinase.	0.996