(34 nodes) Type 1 protein exporter network (Ricinus communis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RCOM_1973880	Colicin V secretion abc transporter, putative. (251 aa)
	RCOM_1598590	Multidrug resistance protein 1, 2, putative. (1252 aa)
	RCOM_1497580	ATNAP8, putative. (712 aa)
	RCOM_1049340	Multidrug resistance protein 1, 2, putative. (1230 aa)
	RCOM_1469280	Antigen peptide transporter, putative. (612 aa)
	RCOM_1083350	Multidrug resistance protein 1, 2, putative. (1271 aa)
	RCOM_1343460	Multidrug resistance protein 1, 2, putative. (1301 aa)
	RCOM_1343570	Multidrug resistance protein 1, 2, putative. (1292 aa)
	RCOM_1343580	Multidrug resistance protein 1, 2, putative. (1292 aa)
	RCOM_1343590	Multidrug resistance protein 1, 2, putative. (1269 aa)
	RCOM_1378070	Multidrug resistance protein 1, 2, putative. (1289 aa)
	RCOM_0852810	Multidrug resistance protein 1, 2, putative. (672 aa)
	RCOM_0853020	Multidrug resistance protein 1, 2, putative. (510 aa)
	RCOM_0855230	Multidrug resistance protein 1, 2, putative. (1259 aa)
	RCOM_1003870	Multidrug resistance protein 1, 2, putative. (1266 aa)
	RCOM_1003880	Multidrug resistance protein 1, 2, putative. (1260 aa)
	RCOM_1354650	Multidrug resistance protein 1, 2, putative. (1352 aa)
	RCOM_0634830	Multidrug resistance protein 1, 2, putative. (1249 aa)
	RCOM_0634950	Multidrug resistance protein 1, 2, putative. (1269 aa)
	RCOM_1064490	Abc transporter, putative. (682 aa)
	RCOM_0182670	Multidrug resistance protein 1, 2, putative. (1217 aa)
	RCOM_1278210	Multidrug resistance protein 1, 2, putative. (1156 aa)
	RCOM_0024850	Abc transporter, putative. (684 aa)
	RCOM_0684690	Multidrug resistance protein 1, 2, putative. (1580 aa)
	RCOM_0292850	Abc transporter, putative. (650 aa)
	RCOM_0460530	Multidrug resistance protein 1, 2, putative. (1265 aa)
	RCOM_0190240	Multidrug resistance protein 1, 2, putative. (1307 aa)
	RCOM_0261010	Transporter ATM1, mitochondrial, putative. (720 aa)
	RCOM_0048860	Multidrug resistance protein, putative. (644 aa)
	RCOM_0346230	Abc transporter, putative. (151 aa)
	RCOM_0270010	Lipid A export ATP-binding/permease protein msba, putative. (584 aa)
	RCOM_2083680	Colicin V secretion abc transporter, putative. (90 aa)
	RCOM_1805960	Abc transporter, putative. (384 aa)
	RCOM_1971480	Colicin V secretion abc transporter, putative. (298 aa)

Your Current Organism:

Ricinus communis

NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCOM_0024850	RCOM_0261010	B9SPK8	B9T3V9	Abc transporter, putative.	Transporter ATM1, mitochondrial, putative.	0.444
RCOM_0048860	RCOM_0261010	B9T5L9	B9T3V9	Multidrug resistance protein, putative.	Transporter ATM1, mitochondrial, putative.	0.444
RCOM_0261010	RCOM_0024850	B9T3V9	B9SPK8	Transporter ATM1, mitochondrial, putative.	Abc transporter, putative.	0.444
RCOM_0261010	RCOM_0048860	B9T3V9	B9T5L9	Transporter ATM1, mitochondrial, putative.	Multidrug resistance protein, putative.	0.444
RCOM_0261010	RCOM_0270010	B9T3V9	B9TCJ5	Transporter ATM1, mitochondrial, putative.	Lipid A export ATP-binding/permease protein msba, putative.	0.444
RCOM_0261010	RCOM_0292850	B9T3V9	B9SWF7	Transporter ATM1, mitochondrial, putative.	Abc transporter, putative.	0.444
RCOM_0261010	RCOM_1064490	B9T3V9	B9S649	Transporter ATM1, mitochondrial, putative.	Abc transporter, putative.	0.444
RCOM_0261010	RCOM_1469280	B9T3V9	B9RLL4	Transporter ATM1, mitochondrial, putative.	Antigen peptide transporter, putative.	0.444
RCOM_0261010	RCOM_1805960	B9T3V9	B9TIQ7	Transporter ATM1, mitochondrial, putative.	Abc transporter, putative.	0.444
RCOM_0270010	RCOM_0261010	B9TCJ5	B9T3V9	Lipid A export ATP-binding/permease protein msba, putative.	Transporter ATM1, mitochondrial, putative.	0.444
RCOM_0292850	RCOM_0261010	B9SWF7	B9T3V9	Abc transporter, putative.	Transporter ATM1, mitochondrial, putative.	0.444
RCOM_1064490	RCOM_0261010	B9S649	B9T3V9	Abc transporter, putative.	Transporter ATM1, mitochondrial, putative.	0.444
RCOM_1469280	RCOM_0261010	B9RLL4	B9T3V9	Antigen peptide transporter, putative.	Transporter ATM1, mitochondrial, putative.	0.444
RCOM_1805960	RCOM_0261010	B9TIQ7	B9T3V9	Abc transporter, putative.	Transporter ATM1, mitochondrial, putative.	0.444