(19 nodes) Patatin-like phospholipase network (Ricinus communis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RCOM_1407220	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (404 aa)
	RCOM_1841260	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (348 aa)
	RCOM_0277370	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (358 aa)
	RCOM_0254330	PNPLA domain-containing protein. (797 aa)
	RCOM_0228310	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (467 aa)
	RCOM_1411270	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (407 aa)
	RCOM_0238390	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (416 aa)
	RCOM_1407210	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (398 aa)
	RCOM_1407190	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (405 aa)
	RCOM_0601950	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (206 aa)
	RCOM_0557780	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (389 aa)
	RCOM_0905300	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (1318 aa)
	RCOM_1345920	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (423 aa)
	RCOM_1345910	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (419 aa)
	RCOM_1591480	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (405 aa)
	RCOM_1591470	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (405 aa)
	RCOM_1591460	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (411 aa)
	RCOM_1591450	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (407 aa)
	RCOM_1591330	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (407 aa)

Your Current Organism:

Ricinus communis

NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCOM_0277370	RCOM_0905300	B9TBA1	B9RXP1	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.	0.530
RCOM_0277370	RCOM_1411270	B9TBA1	B9SRI9	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.	0.432
RCOM_0905300	RCOM_0277370	B9RXP1	B9TBA1	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.	0.530
RCOM_0905300	RCOM_1411270	B9RXP1	B9SRI9	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.	0.514
RCOM_1411270	RCOM_0277370	B9SRI9	B9TBA1	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.	0.432
RCOM_1411270	RCOM_0905300	B9SRI9	B9RXP1	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.	Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.	0.514