STRINGSTRING
RCOM_2159030 RCOM_2159030 RCOM_1267830 RCOM_1267830 RCOM_1267840 RCOM_1267840 RCOM_0924330 RCOM_0924330 RCOM_0968450 RCOM_0968450 rbcL rbcL RCOM_2101250 RCOM_2101250 RCOM_0252330 RCOM_0252330 RCOM_0508820 RCOM_0508820 RCOM_0770220 RCOM_0770220 RCOM_0750280 RCOM_0750280 RCOM_1268300 RCOM_1268300 RCOM_1268290 RCOM_1268290 RCOM_1267980 RCOM_1267980 RCOM_1267870 RCOM_1267870 RCOM_1018980 RCOM_1018980 RCOM_1019090 RCOM_1019090 COQ6 COQ6 RCOM_1063390 RCOM_1063390 RCOM_0088200 RCOM_0088200 RCOM_1101130 RCOM_1101130 RCOM_1267510 RCOM_1267510 RCOM_1267820 RCOM_1267820 RCOM_1267860 RCOM_1267860
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RCOM_2159030Elongation factor 1-alpha, putative. (295 aa)
RCOM_1267830Polygalacturonase, putative. (392 aa)
RCOM_1267840Polygalacturonase, putative. (394 aa)
RCOM_0924330Polygalacturonase-2, putative. (395 aa)
RCOM_0968450Polygalacturonase, putative. (446 aa)
rbcLRibulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. (475 aa)
RCOM_2101250Elongation factor 1-alpha, putative. (167 aa)
RCOM_0252330Alpha-glucosidase, putative; Belongs to the glycosyl hydrolase 31 family. (914 aa)
RCOM_0508820Polygalacturonase, putative. (216 aa)
RCOM_0770220Alpha-glucosidase, putative; Belongs to the glycosyl hydrolase 31 family. (895 aa)
RCOM_0750280Polygalacturonase, putative. (474 aa)
RCOM_1268300Polygalacturonase, putative. (387 aa)
RCOM_1268290Polygalacturonase, putative. (388 aa)
RCOM_1267980Polygalacturonase, putative. (388 aa)
RCOM_1267870Polygalacturonase, putative. (390 aa)
RCOM_1018980Elongation factor 1-alpha, putative. (295 aa)
RCOM_1019090Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (449 aa)
COQ6Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6. (515 aa)
RCOM_1063390Polygalacturonase, putative. (466 aa)
RCOM_0088200Polygalacturonase, putative; Belongs to the glycosyl hydrolase 28 family. (226 aa)
RCOM_1101130Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (449 aa)
RCOM_1267510Polygalacturonase, putative. (393 aa)
RCOM_1267820Polygalacturonase, putative. (393 aa)
RCOM_1267860Polygalacturonase, putative. (390 aa)
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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