STRINGSTRING
RCOM_1590650 RCOM_1590650 RCOM_0292310 RCOM_0292310 RCOM_1599860 RCOM_1599860 RCOM_1000590 RCOM_1000590 RCOM_0697970 RCOM_0697970 RCOM_0831280 RCOM_0831280 RCOM_0526780 RCOM_0526780 RCOM_0492540 RCOM_0492540 RCOM_0770220 RCOM_0770220 RCOM_0252330 RCOM_0252330
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RCOM_1590650Alpha-amylase; Belongs to the glycosyl hydrolase 13 family. (422 aa)
RCOM_0292310Histone H3; Belongs to the histone H3 family. (136 aa)
RCOM_1599860Alpha-amylase; Belongs to the glycosyl hydrolase 13 family. (398 aa)
RCOM_1000590Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1141 aa)
RCOM_0697970Alpha-amylase, putative. (900 aa)
RCOM_0831280Histone H3; Belongs to the histone H3 family. (136 aa)
RCOM_0526780Alpha-amylase, putative. (972 aa)
RCOM_0492540Ethylene receptor; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway. (764 aa)
RCOM_0770220Alpha-glucosidase, putative; Belongs to the glycosyl hydrolase 31 family. (895 aa)
RCOM_0252330Alpha-glucosidase, putative; Belongs to the glycosyl hydrolase 31 family. (914 aa)
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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