STRINGSTRING
RCOM_1589620 RCOM_1589620 RCOM_1602530 RCOM_1602530 RCOM_1499100 RCOM_1499100 PFK PFK RCOM_1510750 RCOM_1510750 RCOM_1609680 RCOM_1609680 RCOM_1614640 RCOM_1614640 RCOM_1618820 RCOM_1618820 RCOM_1524640 RCOM_1524640 RCOM_1526810 RCOM_1526810 RCOM_1576440 RCOM_1576440 RCOM_1576470 RCOM_1576470 RCOM_1046300 RCOM_1046300 PFK-2 PFK-2 RCOM_0943710 RCOM_0943710 RCOM_1465120 RCOM_1465120 RCOM_0920830 RCOM_0920830 RCOM_0921770 RCOM_0921770 RCOM_1487470 RCOM_1487470 PFK-3 PFK-3 LSM1 LSM1 PFK-4 PFK-4 RCOM_0799080 RCOM_0799080 RCOM_1023530 RCOM_1023530 RCOM_0817860 RCOM_0817860 RCOM_0812530 RCOM_0812530 RCOM_1351720 RCOM_1351720 RCOM_0866780 RCOM_0866780 RCOM_1194900 RCOM_1194900 RCOM_0730930 RCOM_0730930 RCOM_0731100 RCOM_0731100 RCOM_0673440 RCOM_0673440 RCOM_1722530 RCOM_1722530 RCOM_0875030 RCOM_0875030 RCOM_0610260 RCOM_0610260 RCOM_0522460 RCOM_0522460 LSM4 LSM4 RCOM_0342910 RCOM_0342910 RCOM_1282470 RCOM_1282470 LSM8 LSM8 RCOM_0419820 RCOM_0419820 RCOM_1522480 RCOM_1522480 RCOM_1095710 RCOM_1095710 RCOM_0647870 RCOM_0647870 PFK-5 PFK-5 RCOM_0819690 RCOM_0819690 RCOM_1121820 RCOM_1121820 RCOM_1321070 RCOM_1321070 RCOM_0577590 RCOM_0577590 RCOM_1027520 RCOM_1027520 RCOM_0296620 RCOM_0296620 RCOM_1627130 RCOM_1627130 RCOM_1627470 RCOM_1627470 RCOM_0470900 RCOM_0470900 RCOM_0311770 RCOM_0311770 RCOM_0496650 RCOM_0496650 RCOM_0382120 RCOM_0382120 RCOM_1016570 RCOM_1016570 RCOM_0752590 RCOM_0752590 RCOM_0259980 RCOM_0259980 RCOM_0033810 RCOM_0033810 RCOM_0225810 RCOM_0225810 RCOM_0347880 RCOM_0347880 RCOM_0327460 RCOM_0327460 RCOM_0490080 RCOM_0490080 RCOM_1259240 RCOM_1259240 RCOM_0267750 RCOM_0267750 PFK-6 PFK-6 RCOM_0063290 RCOM_0063290 RCOM_0041430 RCOM_0041430 RCOM_0645430 RCOM_0645430 RCOM_0272140 RCOM_0272140 RCOM_0374000 RCOM_0374000 LSM3 LSM3 LSM1-2 LSM1-2 RCOM_0444530 RCOM_0444530 RCOM_0300280 RCOM_0300280 RCOM_0103060 RCOM_0103060 RCOM_0151030 RCOM_0151030
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RCOM_1589620Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (658 aa)
RCOM_1602530O-linked n-acetylglucosamine transferase, ogt, putative. (1236 aa)
RCOM_1499100Enolase, putative. (445 aa)
PFKATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (522 aa)
RCOM_1510750Exosome complex exonuclease RRP40, putative. (234 aa)
RCOM_1609680Ccr4-not transcription complex, putative. (2330 aa)
RCOM_1614640Dead box ATP-dependent RNA helicase, putative; Belongs to the DEAD box helicase family. (507 aa)
RCOM_1618820Enolase, putative. (490 aa)
RCOM_1524640Sm domain-containing protein. (99 aa)
RCOM_1526810Ribonucleoprotein, chloroplast, putative. (256 aa)
RCOM_1576440Uncharacterized protein. (809 aa)
RCOM_1576470Uncharacterized protein. (777 aa)
RCOM_1046300WD_REPEATS_REGION domain-containing protein. (831 aa)
PFK-2ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (632 aa)
RCOM_0943710ATP-dependent RNA helicase, putative. (1129 aa)
RCOM_1465120Rubisco subunit binding-protein beta subunit, rubb, putative; Belongs to the chaperonin (HSP60) family. (592 aa)
RCOM_0920830Uncharacterized protein. (206 aa)
RCOM_0921770Ccr4-associated factor, putative. (274 aa)
RCOM_1487470Polyadenylate-binding protein, putative. (608 aa)
PFK-3ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (543 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (128 aa)
PFK-4ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (485 aa)
RCOM_0799080Exosome complex exonuclease RRP46, putative. (211 aa)
RCOM_1023530Chaperonin-60kD, ch60, putative; Belongs to the chaperonin (HSP60) family. (574 aa)
RCOM_0817860Heat shock protein, putative; Belongs to the heat shock protein 70 family. (657 aa)
RCOM_0812530Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (644 aa)
RCOM_1351720Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (632 aa)
RCOM_0866780RNA exonuclease NGL1, putative. (443 aa)
RCOM_1194900ATP-dependent RNA helicase, putative. (1229 aa)
RCOM_0730930Helicase, putative. (1335 aa)
RCOM_0731100Enolase, putative. (469 aa)
RCOM_0673440Uncharacterized protein. (739 aa)
RCOM_1722530Chaperonin-60kD, ch60, putative; Belongs to the chaperonin (HSP60) family. (575 aa)
RCOM_0875030Mitotic control protein dis3, putative; Belongs to the RNR ribonuclease family. (934 aa)
RCOM_0610260Ammonium transporter. (510 aa)
RCOM_0522460Uncharacterized protein. (699 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (147 aa)
RCOM_0342910Rubisco subunit binding-protein beta subunit, rubb, putative; Belongs to the chaperonin (HSP60) family. (605 aa)
RCOM_1282470Ccr4-associated factor, putative. (281 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
RCOM_0419820ATP-dependent RNA helicase, putative. (994 aa)
RCOM_1522480Nucleic acid binding protein, putative. (526 aa)
RCOM_1095710Polyribonucleotide nucleotidyltransferase, putative. (958 aa)
RCOM_0647870Rrp4, putative. (322 aa)
PFK-5ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (561 aa)
RCOM_0819690RING-type domain-containing protein. (140 aa)
RCOM_1121820Uncharacterized protein. (889 aa)
RCOM_1321070Polyribonucleotide nucleotidyltransferase, putative. (948 aa)
RCOM_0577590ATP-dependent RNA helicase, putative. (1172 aa)
RCOM_1027520Uncharacterized protein. (795 aa)
RCOM_0296620Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (657 aa)
RCOM_1627130Ribonuclease, putative. (624 aa)
RCOM_1627470CRM domain-containing protein. (458 aa)
RCOM_0470900Ccr4-associated factor, putative. (274 aa)
RCOM_0311770Chaperonin-60kD, ch60, putative; Belongs to the chaperonin (HSP60) family. (573 aa)
RCOM_0496650Helicase, putative. (991 aa)
RCOM_0382120Enolase, putative. (445 aa)
RCOM_1016570Cell differentiation protein rcd1, putative. (341 aa)
RCOM_0752590Cell differentiation protein rcd1, putative. (328 aa)
RCOM_0259980Sulfate/thiosulfate import ATP-binding protein cysA, putative. (209 aa)
RCOM_0033810Exosome complex exonuclease RRP41, putative. (180 aa)
RCOM_0225810Ccr4-associated factor, putative. (292 aa)
RCOM_0347880Exosome complex exonuclease rrp42, putative. (287 aa)
RCOM_0327460CCR4-NOT transcription complex subunit, putative. (664 aa)
RCOM_0490080Exosome complex exonuclease RRP41, putative. (241 aa)
RCOM_1259240Uncharacterized protein. (366 aa)
RCOM_0267750Uncharacterized protein. (1344 aa)
PFK-6ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (431 aa)
RCOM_0063290Exosome complex exonuclease rrp45, putative. (463 aa)
RCOM_0041430Carbon catabolite repressor protein, putative. (603 aa)
RCOM_0645430Helicase, putative. (962 aa)
RCOM_0272140Uncharacterized protein. (851 aa)
RCOM_0374000Exosome complex exonuclease rrp43, putative. (303 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (97 aa)
LSM1-2U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (128 aa)
RCOM_0444530Ccr4-associated factor, putative. (294 aa)
RCOM_0300280Uncharacterized protein. (189 aa)
RCOM_0103060Cobalt import ATP-binding protein cbiO, putative. (324 aa)
RCOM_0151030Small nuclear ribonucleoprotein f, putative. (91 aa)
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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