Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LSM3 | LSM4 | B9T2G3 | B9SAP2 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.997 |
| LSM3 | LSM8 | B9T2G3 | B9SCZ8 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
| LSM3 | RCOM_0014080 | B9T2G3 | B9T6Y0 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Protein G10, putative. | 0.449 |
| LSM3 | RCOM_0017870 | B9T2G3 | B9SXM7 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Small nuclear ribonucleoprotein f, putative. | 0.977 |
| LSM3 | RCOM_0075460 | B9T2G3 | B9SW84 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Dead box ATP-dependent RNA helicase, putative. | 0.402 |
| LSM3 | RCOM_0112090 | B9T2G3 | B9SR88 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Spliceosome associated protein, putative. | 0.828 |
| LSM3 | RCOM_0151030 | B9T2G3 | B9T839 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Small nuclear ribonucleoprotein f, putative. | 0.999 |
| LSM3 | RCOM_0186810 | B9T2G3 | B9T1J2 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Pre-mRNA-splicing factor ini1. | 0.881 |
| LSM3 | RCOM_0222550 | B9T2G3 | B9SEQ9 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.954 |
| LSM3 | RCOM_0255520 | B9T2G3 | B9SVT1 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U4/U6 small nuclear ribonucleoprotein Prp4, putative. | 0.977 |
| LSM3 | RCOM_0293010 | B9T2G3 | B9SWG3 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Small nuclear ribonucleoprotein G. | 0.995 |
| LSM3 | RCOM_0312580 | B9T2G3 | B9SN43 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Dead box ATP-dependent RNA helicase, putative; Belongs to the DEAD box helicase family. | 0.402 |
| LSM3 | RCOM_0386800 | B9T2G3 | B9T8E6 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Spliceosomal protein sap, putative. | 0.801 |
| LSM3 | RCOM_0510040 | B9T2G3 | B9T2N2 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 116 kD U5 small nuclear ribonucleoprotein component, putative. | 0.976 |
| LSM3 | RCOM_0523340 | B9T2G3 | B9S9Y0 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Pre-mRNA-splicing factor cwc15, putative. | 0.785 |
| LSM3 | RCOM_0523630 | B9T2G3 | B9S9Y9 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.991 |
| LSM3 | RCOM_0527090 | B9T2G3 | B9SH73 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U4/U6 small nuclear ribonucleoprotein Prp31, putative. | 0.979 |
| LSM3 | RCOM_0556840 | B9T2G3 | B9S3X9 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.553 |
| LSM3 | RCOM_0557340 | B9T2G3 | B9S407 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Potassium channel regulatory factor, putative. | 0.773 |
| LSM3 | RCOM_0558720 | B9T2G3 | B9S445 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. | 0.992 |
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