33 items (Oryza sativa Indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OsI_01022	Uncharacterized protein. (119 aa)
	OsI_01562	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (60 aa)
	OsI_01816	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (152 aa)
	OsI_03446	Ribosomal_L28e domain-containing protein. (145 aa)
	OsI_04390	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (110 aa)
	OsI_06769	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (137 aa)
	OsI_07870	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (219 aa)
	OsI_09420	Ribosomal protein L37; Binds to the 23S rRNA. (95 aa)
	OsI_09955	Uncharacterized protein. (164 aa)
	OsI_12360	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (206 aa)
	OsI_13894	ENT domain-containing protein. (817 aa)
	OsI_17237	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (179 aa)
	OsI_18515	60S ribosomal protein l18. (188 aa)
	OsI_20403	TRASH domain-containing protein. (161 aa)
	OsI_21918	Uncharacterized protein. (51 aa)
	OsI_22747	Uncharacterized protein. (124 aa)
	OsI_26845	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (146 aa)
	OsI_27305	Uncharacterized protein. (130 aa)
	OsI_27602	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (110 aa)
	OsI_27926	Uncharacterized protein. (138 aa)
	OsI_29358	Uncharacterized protein. (118 aa)
	OsI_31831	60S ribosomal protein l9. (190 aa)
	OsI_34997	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (320 aa)
	OsI_35258	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (389 aa)
	OsI_36214	BAG domain-containing protein. (463 aa)
	OsI_37478	KOW domain-containing protein. (150 aa)
	OsI_09204	Uncharacterized protein. (120 aa)
	OsI_08955	Uncharacterized protein. (111 aa)
	OsI_13555	Uncharacterized protein. (101 aa)
	OsI_16636	Ribosomal_L14e domain-containing protein. (134 aa)
	OsI_17293	Uncharacterized protein. (244 aa)
	OsI_30009	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (171 aa)
	OsI_31924	Uncharacterized protein. (171 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OsI_01022	OsI_01562	A2WMF3	A2WNY2	Uncharacterized protein.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.992
OsI_01022	OsI_01816	A2WMF3	A2WPN6	Uncharacterized protein.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.978
OsI_01022	OsI_03446	A2WMF3	A2WU95	Uncharacterized protein.	Ribosomal_L28e domain-containing protein.	0.973
OsI_01022	OsI_04390	A2WMF3	A2WWV9	Uncharacterized protein.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.973
OsI_01022	OsI_06769	A2WMF3	A2X3I0	Uncharacterized protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.979
OsI_01022	OsI_07870	A2WMF3	A2X6N1	Uncharacterized protein.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.980
OsI_01022	OsI_08955	A2WMF3	B8AIR7	Uncharacterized protein.	Uncharacterized protein.	0.968
OsI_01022	OsI_09204	A2WMF3	B8AE10	Uncharacterized protein.	Uncharacterized protein.	0.968
OsI_01022	OsI_09420	A2WMF3	A2XAY8	Uncharacterized protein.	Ribosomal protein L37; Binds to the 23S rRNA.	0.975
OsI_01022	OsI_09955	A2WMF3	A2XCC4	Uncharacterized protein.	Uncharacterized protein.	0.992
OsI_01022	OsI_12360	A2WMF3	A2XIU7	Uncharacterized protein.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.978
OsI_01022	OsI_13555	A2WMF3	B8AK68	Uncharacterized protein.	Uncharacterized protein.	0.963
OsI_01022	OsI_13894	A2WMF3	A2XMW9	Uncharacterized protein.	ENT domain-containing protein.	0.981
OsI_01022	OsI_16636	A2WMF3	B8AS12	Uncharacterized protein.	Ribosomal_L14e domain-containing protein.	0.968
OsI_01022	OsI_17237	A2WMF3	A2XX38	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	0.974
OsI_01022	OsI_17293	A2WMF3	B8ATU3	Uncharacterized protein.	Uncharacterized protein.	0.964
OsI_01022	OsI_18515	A2WMF3	A2Y0K0	Uncharacterized protein.	60S ribosomal protein l18.	0.969
OsI_01022	OsI_20403	A2WMF3	A2Y5X8	Uncharacterized protein.	TRASH domain-containing protein.	0.980
OsI_01022	OsI_21918	A2WMF3	A2YA08	Uncharacterized protein.	Uncharacterized protein.	0.980
OsI_01022	OsI_22747	A2WMF3	A2YCB1	Uncharacterized protein.	Uncharacterized protein.	0.975

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