STRINGSTRING
OsI_01562 OsI_01562 OsI_06769 OsI_06769 OsI_07870 OsI_07870 OsI_09955 OsI_09955 OsI_20403 OsI_20403 OsI_35258 OsI_35258 OsI_30009 OsI_30009
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OsI_0156260S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (60 aa)
OsI_0676960S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (137 aa)
OsI_0787060S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (219 aa)
OsI_09955Uncharacterized protein. (164 aa)
OsI_20403TRASH domain-containing protein. (161 aa)
OsI_35258Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (389 aa)
OsI_30009Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (171 aa)
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.