24 items (Oryza sativa Indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Others

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protein homology

Your Input:
	OsI_04736	Uncharacterized protein. (197 aa)
	OsI_04749	KH_dom_type_1 domain-containing protein. (239 aa)
	OsI_05937	Uncharacterized protein. (1290 aa)
	OsI_07612	Uncharacterized protein. (408 aa)
	OsI_14290	Uncharacterized protein. (260 aa)
	OsI_27604	Uncharacterized protein. (262 aa)
	OsI_28540	Uncharacterized protein. (209 aa)
	OsI_04386	RNB domain-containing protein. (774 aa)
	OsI_00145	RanBP2-type domain-containing protein. (780 aa)
	OsI_09429	EXOSC1 domain-containing protein. (192 aa)
	OsI_08979	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1010 aa)
	OsI_09834	Uncharacterized protein; Belongs to the RNR ribonuclease family. (919 aa)
	OsI_09977	Uncharacterized protein. (138 aa)
	OsI_14380	RNase_PH domain-containing protein. (238 aa)
	OsI_10088	HRDC domain-containing protein. (599 aa)
	OsI_17929	Uncharacterized protein. (700 aa)
	OsI_16671	S1 domain-containing protein. (315 aa)
	OsI_15383	Importin N-terminal domain-containing protein. (1029 aa)
	OsI_26176	HRDC domain-containing protein. (949 aa)
	OsI_30553	Uncharacterized protein. (242 aa)
	OsI_33743	HRDC domain-containing protein. (854 aa)
	OsI_35924	Uncharacterized protein. (306 aa)
	OsI_37983	Uncharacterized protein. (776 aa)
	OsI_38058	Uncharacterized protein. (334 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OsI_00145	OsI_04386	B8ACX9	B8AC13	RanBP2-type domain-containing protein.	RNB domain-containing protein.	0.931
OsI_00145	OsI_04736	B8ACX9	A2WXT4	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.954
OsI_00145	OsI_04749	B8ACX9	A2WXU6	RanBP2-type domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.954
OsI_00145	OsI_05937	B8ACX9	A2X156	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.859
OsI_00145	OsI_07612	B8ACX9	A2X5Y3	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.981
OsI_00145	OsI_08979	B8ACX9	B8AIS9	RanBP2-type domain-containing protein.	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	0.931
OsI_00145	OsI_09429	B8ACX9	B8AET8	RanBP2-type domain-containing protein.	EXOSC1 domain-containing protein.	0.981
OsI_00145	OsI_09834	B8ACX9	B8AMD6	RanBP2-type domain-containing protein.	Uncharacterized protein; Belongs to the RNR ribonuclease family.	0.931
OsI_00145	OsI_09977	B8ACX9	B8AMX5	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.931
OsI_00145	OsI_10088	B8ACX9	B8ANU3	RanBP2-type domain-containing protein.	HRDC domain-containing protein.	0.817
OsI_00145	OsI_14290	B8ACX9	A2XNZ0	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.924
OsI_00145	OsI_14380	B8ACX9	B8ANR0	RanBP2-type domain-containing protein.	RNase_PH domain-containing protein.	0.980
OsI_00145	OsI_15383	B8ACX9	B8ASB1	RanBP2-type domain-containing protein.	Importin N-terminal domain-containing protein.	0.771
OsI_00145	OsI_16671	B8ACX9	B8AS29	RanBP2-type domain-containing protein.	S1 domain-containing protein.	0.980
OsI_00145	OsI_17929	B8ACX9	B8ARG8	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.914
OsI_00145	OsI_26176	B8ACX9	B8B6L8	RanBP2-type domain-containing protein.	HRDC domain-containing protein.	0.817
OsI_00145	OsI_27604	B8ACX9	A2YQN5	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.924
OsI_00145	OsI_30553	B8ACX9	B8BDD9	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.924
OsI_00145	OsI_33743	B8ACX9	B8BH23	RanBP2-type domain-containing protein.	HRDC domain-containing protein.	0.817
OsI_00145	OsI_35924	B8ACX9	B8BK82	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.981

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