STRINGSTRING
OsI_04630 OsI_04630 OsI_13440 OsI_13440 OsI_09621 OsI_09621 OsI_28223 OsI_28223 OsI_31573 OsI_31573
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OsI_04630SHMT domain-containing protein. (600 aa)
OsI_13440Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (513 aa)
OsI_09621Formyl_trans_N domain-containing protein. (303 aa)
OsI_28223MGS domain-containing protein. (587 aa)
OsI_31573Uncharacterized protein. (639 aa)
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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