(35 nodes) NADH dehydrogenase (ubiquinone) activity, and Complex I biogenesis network (Oryza sativa Indica)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:
	OsI_03544	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family. (199 aa)
	OsI_07438	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (272 aa)
	OsI_07574	UCR_hinge domain-containing protein. (167 aa)
	OsI_09840	Uncharacterized protein. (109 aa)
	OsI_11285	Uncharacterized protein. (195 aa)
	OsI_20756	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family. (204 aa)
	OsI_24684	Uncharacterized protein. (135 aa)
	OsI_27047	Uncharacterized protein. (131 aa)
	OsI_27090	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. (529 aa)
	OsI_34770	Uncharacterized protein. (105 aa)
	OsI_02230	Uncharacterized protein. (91 aa)
	OsI_03933	Plus3 domain-containing protein. (895 aa)
	OsI_09314	Cyclin N-terminal domain-containing protein. (366 aa)
	OsI_09443	Epimerase domain-containing protein. (408 aa)
	OsI_12075	Uncharacterized protein. (396 aa)
	OsI_13702	Uncharacterized protein. (261 aa)
	OsI_11140	CHCH domain-containing protein. (110 aa)
	OsI_10347	Uncharacterized protein. (142 aa)
	OsI_13269	Uncharacterized protein. (627 aa)
	OsI_13270	4Fe-4S His(Cys)3-ligated-type domain-containing protein. (328 aa)
	OsI_15333	L51_S25_CI-B8 domain-containing protein. (99 aa)
	OsI_19367	Cytochrome c domain-containing protein. (317 aa)
	OsI_20569	Uncharacterized protein. (274 aa)
	OsI_24449	Uncharacterized protein; Belongs to the complex I LYR family. (113 aa)
	OsI_26657	Uncharacterized protein. (159 aa)
	OsI_25318	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. (123 aa)
	OsI_28650	Uncharacterized protein; Belongs to the complex I subunit 5 family. (516 aa)
	OsI_28651	Uncharacterized protein. (68 aa)
	OsI_28652	Uncharacterized protein; Belongs to the complex I subunit 6 family. (673 aa)
	OsI_27911	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (117 aa)
	OsI_34794	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (160 aa)
	OsI_34798	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (279 aa)
	ndhJ	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. (159 aa)
	psaC	Photosystem I iron-sulfur center; Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex. Required for binding of PsaD and PsaE to PSI. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, [...] (81 aa)
	ndhB2	NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Belongs to the complex I subunit 2 family. (510 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OsI_02230	OsI_03544	B8A9A9	A2WUJ3	Uncharacterized protein.	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	0.985
OsI_02230	OsI_03933	B8A9A9	B8AA69	Uncharacterized protein.	Plus3 domain-containing protein.	0.996
OsI_02230	OsI_07438	B8A9A9	A2X5F8	Uncharacterized protein.	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.917
OsI_02230	OsI_07574	B8A9A9	A2X5T8	Uncharacterized protein.	UCR_hinge domain-containing protein.	0.911
OsI_02230	OsI_09314	B8A9A9	B8AEE0	Uncharacterized protein.	Cyclin N-terminal domain-containing protein.	0.966
OsI_02230	OsI_09443	B8A9A9	B8AEU4	Uncharacterized protein.	Epimerase domain-containing protein.	0.966
OsI_02230	OsI_09840	B8A9A9	A2XC22	Uncharacterized protein.	Uncharacterized protein.	0.980
OsI_02230	OsI_10347	B8A9A9	B8AQ47	Uncharacterized protein.	Uncharacterized protein.	0.981
OsI_02230	OsI_11140	B8A9A9	B8AM01	Uncharacterized protein.	CHCH domain-containing protein.	0.981
OsI_02230	OsI_11285	B8A9A9	A2XFY5	Uncharacterized protein.	Uncharacterized protein.	0.909
OsI_02230	OsI_12075	B8A9A9	B8AK30	Uncharacterized protein.	Uncharacterized protein.	0.985
OsI_02230	OsI_13269	B8A9A9	B8AQR2	Uncharacterized protein.	Uncharacterized protein.	0.996
OsI_02230	OsI_13270	B8A9A9	B8AQR3	Uncharacterized protein.	4Fe-4S His(Cys)3-ligated-type domain-containing protein.	0.996
OsI_02230	OsI_13702	B8A9A9	B8AKK1	Uncharacterized protein.	Uncharacterized protein.	0.996
OsI_02230	OsI_15333	B8A9A9	B8AS84	Uncharacterized protein.	L51_S25_CI-B8 domain-containing protein.	0.982
OsI_02230	OsI_19367	B8A9A9	B8AWB5	Uncharacterized protein.	Cytochrome c domain-containing protein.	0.943
OsI_02230	OsI_20569	B8A9A9	B8AZT0	Uncharacterized protein.	Uncharacterized protein.	0.996
OsI_02230	OsI_20756	B8A9A9	A2Y6V1	Uncharacterized protein.	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	0.985
OsI_02230	OsI_24449	B8A9A9	B8B2H7	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.978
OsI_02230	OsI_24684	B8A9A9	A2YHL1	Uncharacterized protein.	Uncharacterized protein.	0.985

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