12 items (Oryza sativa Indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OsI_07389	Uncharacterized protein. (207 aa)
	OsI_16394	RING-type domain-containing protein. (285 aa)
	OsI_17025	RING-type domain-containing protein. (267 aa)
	OsI_17710	Uncharacterized protein. (498 aa)
	OsI_27502	RING-type domain-containing protein. (442 aa)
	OsI_07416	Uncharacterized protein. (511 aa)
	OsI_07441	Uncharacterized protein. (515 aa)
	OsI_07442	Uncharacterized protein. (450 aa)
	OsI_07450	Uncharacterized protein. (215 aa)
	OsI_10167	RING-type domain-containing protein. (478 aa)
	OsI_19119	RING-type domain-containing protein. (211 aa)
	OsI_29973	Uncharacterized protein. (433 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OsI_07389	OsI_10167	A2X5B8	B8AP98	Uncharacterized protein.	RING-type domain-containing protein.	0.621
OsI_07389	OsI_16394	A2X5B8	A2XUV7	Uncharacterized protein.	RING-type domain-containing protein.	0.621
OsI_07389	OsI_27502	A2X5B8	A2YQD6	Uncharacterized protein.	RING-type domain-containing protein.	0.621
OsI_07416	OsI_10167	B8AIN5	B8AP98	Uncharacterized protein.	RING-type domain-containing protein.	0.621
OsI_07416	OsI_16394	B8AIN5	A2XUV7	Uncharacterized protein.	RING-type domain-containing protein.	0.621
OsI_07416	OsI_27502	B8AIN5	A2YQD6	Uncharacterized protein.	RING-type domain-containing protein.	0.621
OsI_07441	OsI_10167	B8AIP4	B8AP98	Uncharacterized protein.	RING-type domain-containing protein.	0.621
OsI_07441	OsI_16394	B8AIP4	A2XUV7	Uncharacterized protein.	RING-type domain-containing protein.	0.621
OsI_07441	OsI_27502	B8AIP4	A2YQD6	Uncharacterized protein.	RING-type domain-containing protein.	0.621
OsI_07442	OsI_10167	B8AIP5	B8AP98	Uncharacterized protein.	RING-type domain-containing protein.	0.621
OsI_07442	OsI_16394	B8AIP5	A2XUV7	Uncharacterized protein.	RING-type domain-containing protein.	0.621
OsI_07442	OsI_27502	B8AIP5	A2YQD6	Uncharacterized protein.	RING-type domain-containing protein.	0.621
OsI_07450	OsI_10167	B8AIQ5	B8AP98	Uncharacterized protein.	RING-type domain-containing protein.	0.621
OsI_07450	OsI_16394	B8AIQ5	A2XUV7	Uncharacterized protein.	RING-type domain-containing protein.	0.621
OsI_07450	OsI_27502	B8AIQ5	A2YQD6	Uncharacterized protein.	RING-type domain-containing protein.	0.621
OsI_10167	OsI_07389	B8AP98	A2X5B8	RING-type domain-containing protein.	Uncharacterized protein.	0.621
OsI_10167	OsI_07416	B8AP98	B8AIN5	RING-type domain-containing protein.	Uncharacterized protein.	0.621
OsI_10167	OsI_07441	B8AP98	B8AIP4	RING-type domain-containing protein.	Uncharacterized protein.	0.621
OsI_10167	OsI_07442	B8AP98	B8AIP5	RING-type domain-containing protein.	Uncharacterized protein.	0.621
OsI_10167	OsI_07450	B8AP98	B8AIQ5	RING-type domain-containing protein.	Uncharacterized protein.	0.621

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