10 items (Oryza sativa Indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OsI_02057	Uncharacterized protein. (225 aa)
	OsI_05874	Uncharacterized protein. (349 aa)
	OsI_16132	PLAT domain-containing protein. (190 aa)
	OsI_23378	PLAT domain-containing protein. (194 aa)
	OsI_30788	Myb_CC_LHEQLE domain-containing protein. (183 aa)
	OsI_01945	Uncharacterized protein. (215 aa)
	OsI_14765	PB1 domain-containing protein. (216 aa)
	OsI_28563	Uncharacterized protein. (567 aa)
	OsI_28907	Myb_CC_LHEQLE domain-containing protein. (254 aa)
	OsI_39154	MBD domain-containing protein. (303 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OsI_01945	OsI_16132	B8A882	A2XU58	Uncharacterized protein.	PLAT domain-containing protein.	0.425
OsI_01945	OsI_23378	B8A882	A2YE33	Uncharacterized protein.	PLAT domain-containing protein.	0.455
OsI_02057	OsI_16132	A2WQC8	A2XU58	Uncharacterized protein.	PLAT domain-containing protein.	0.444
OsI_02057	OsI_23378	A2WQC8	A2YE33	Uncharacterized protein.	PLAT domain-containing protein.	0.452
OsI_02057	OsI_28907	A2WQC8	B8B9Z7	Uncharacterized protein.	Myb_CC_LHEQLE domain-containing protein.	0.405
OsI_02057	OsI_30788	A2WQC8	A2YZK6	Uncharacterized protein.	Myb_CC_LHEQLE domain-containing protein.	0.461
OsI_14765	OsI_28907	B8AUZ1	B8B9Z7	PB1 domain-containing protein.	Myb_CC_LHEQLE domain-containing protein.	0.477
OsI_14765	OsI_30788	B8AUZ1	A2YZK6	PB1 domain-containing protein.	Myb_CC_LHEQLE domain-containing protein.	0.502
OsI_16132	OsI_01945	A2XU58	B8A882	PLAT domain-containing protein.	Uncharacterized protein.	0.425
OsI_16132	OsI_02057	A2XU58	A2WQC8	PLAT domain-containing protein.	Uncharacterized protein.	0.444
OsI_23378	OsI_01945	A2YE33	B8A882	PLAT domain-containing protein.	Uncharacterized protein.	0.455
OsI_23378	OsI_02057	A2YE33	A2WQC8	PLAT domain-containing protein.	Uncharacterized protein.	0.452
OsI_28563	OsI_30788	B8B900	A2YZK6	Uncharacterized protein.	Myb_CC_LHEQLE domain-containing protein.	0.422
OsI_28563	OsI_39154	B8B900	B8BN22	Uncharacterized protein.	MBD domain-containing protein.	0.527
OsI_28907	OsI_02057	B8B9Z7	A2WQC8	Myb_CC_LHEQLE domain-containing protein.	Uncharacterized protein.	0.405
OsI_28907	OsI_14765	B8B9Z7	B8AUZ1	Myb_CC_LHEQLE domain-containing protein.	PB1 domain-containing protein.	0.477
OsI_30788	OsI_02057	A2YZK6	A2WQC8	Myb_CC_LHEQLE domain-containing protein.	Uncharacterized protein.	0.461
OsI_30788	OsI_14765	A2YZK6	B8AUZ1	Myb_CC_LHEQLE domain-containing protein.	PB1 domain-containing protein.	0.502
OsI_30788	OsI_28563	A2YZK6	B8B900	Myb_CC_LHEQLE domain-containing protein.	Uncharacterized protein.	0.422
OsI_39154	OsI_28563	B8BN22	B8B900	MBD domain-containing protein.	Uncharacterized protein.	0.527

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