23 items (Oryza sativa Indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	OsI_08979	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1010 aa)
	OsI_04736	Uncharacterized protein. (197 aa)
	OsI_04749	KH_dom_type_1 domain-containing protein. (239 aa)
	OsI_07612	Uncharacterized protein. (408 aa)
	OsI_13490	SUV3_C domain-containing protein. (155 aa)
	OsI_14290	Uncharacterized protein. (260 aa)
	OsI_27604	Uncharacterized protein. (262 aa)
	OsI_28540	Uncharacterized protein. (209 aa)
	OsI_04386	RNB domain-containing protein. (774 aa)
	OsI_13485	Uncharacterized protein. (628 aa)
	OsI_09834	Uncharacterized protein; Belongs to the RNR ribonuclease family. (919 aa)
	OsI_09977	Uncharacterized protein. (138 aa)
	OsI_14380	RNase_PH domain-containing protein. (238 aa)
	OsI_10088	HRDC domain-containing protein. (599 aa)
	OsI_16671	S1 domain-containing protein. (315 aa)
	OsI_16163	SUV3_C domain-containing protein. (128 aa)
	OsI_16164	Uncharacterized protein. (465 aa)
	OsI_26176	HRDC domain-containing protein. (949 aa)
	OsI_30553	Uncharacterized protein. (242 aa)
	OsI_33743	HRDC domain-containing protein. (854 aa)
	OsI_35924	Uncharacterized protein. (306 aa)
	OsI_38762	Uncharacterized protein. (1612 aa)
	OsI_38058	Uncharacterized protein. (334 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OsI_04386	OsI_04736	B8AC13	A2WXT4	RNB domain-containing protein.	Uncharacterized protein.	0.959
OsI_04386	OsI_04749	B8AC13	A2WXU6	RNB domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.959
OsI_04386	OsI_07612	B8AC13	A2X5Y3	RNB domain-containing protein.	Uncharacterized protein.	0.982
OsI_04386	OsI_10088	B8AC13	B8ANU3	RNB domain-containing protein.	HRDC domain-containing protein.	0.955
OsI_04386	OsI_13485	B8AC13	B8AJV2	RNB domain-containing protein.	Uncharacterized protein.	0.810
OsI_04386	OsI_13490	B8AC13	A2XLY5	RNB domain-containing protein.	SUV3_C domain-containing protein.	0.810
OsI_04386	OsI_14290	B8AC13	A2XNZ0	RNB domain-containing protein.	Uncharacterized protein.	0.950
OsI_04386	OsI_14380	B8AC13	B8ANR0	RNB domain-containing protein.	RNase_PH domain-containing protein.	0.983
OsI_04386	OsI_16163	B8AC13	B8AUQ6	RNB domain-containing protein.	SUV3_C domain-containing protein.	0.810
OsI_04386	OsI_16164	B8AC13	B8AUQ7	RNB domain-containing protein.	Uncharacterized protein.	0.810
OsI_04386	OsI_16671	B8AC13	B8AS29	RNB domain-containing protein.	S1 domain-containing protein.	0.979
OsI_04386	OsI_26176	B8AC13	B8B6L8	RNB domain-containing protein.	HRDC domain-containing protein.	0.963
OsI_04386	OsI_27604	B8AC13	A2YQN5	RNB domain-containing protein.	Uncharacterized protein.	0.950
OsI_04386	OsI_28540	B8AC13	A2YT95	RNB domain-containing protein.	Uncharacterized protein.	0.920
OsI_04386	OsI_30553	B8AC13	B8BDD9	RNB domain-containing protein.	Uncharacterized protein.	0.961
OsI_04386	OsI_33743	B8AC13	B8BH23	RNB domain-containing protein.	HRDC domain-containing protein.	0.955
OsI_04386	OsI_35924	B8AC13	B8BK82	RNB domain-containing protein.	Uncharacterized protein.	0.980
OsI_04386	OsI_38058	B8AC13	B8BP86	RNB domain-containing protein.	Uncharacterized protein.	0.982
OsI_04736	OsI_04386	A2WXT4	B8AC13	Uncharacterized protein.	RNB domain-containing protein.	0.959
OsI_04736	OsI_07612	A2WXT4	A2X5Y3	Uncharacterized protein.	Uncharacterized protein.	0.993

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