11 items (Oryza sativa Indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PURA-2	Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. (476 aa)
	OsI_16544	Pribosyltran domain-containing protein. (212 aa)
	OsI_08054	Uncharacterized protein. (199 aa)
	OsI_38949	Pribosyltran domain-containing protein. (188 aa)
	OsI_38931	Pribosyltran domain-containing protein. (186 aa)
	OsI_08139	PfkB domain-containing protein. (319 aa)
	PURA	Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity). Belongs to the adenylosuccinate synthetase family. (487 aa)
	OsI_16657	PfkB domain-containing protein. (370 aa)
	OsI_26014	Pribosyltran domain-containing protein. (202 aa)
	OsI_11289	Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (543 aa)
	OsI_08056	Pribosyltran domain-containing protein. (223 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OsI_08054	OsI_08139	B8AFE9	A2X7E9	Uncharacterized protein.	PfkB domain-containing protein.	0.916
OsI_08054	OsI_11289	B8AFE9	A2XFY9	Uncharacterized protein.	Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.	0.951
OsI_08054	OsI_16657	B8AFE9	B8AS20	Uncharacterized protein.	PfkB domain-containing protein.	0.916
OsI_08054	OsI_38931	B8AFE9	A2ZM75	Uncharacterized protein.	Pribosyltran domain-containing protein.	0.952
OsI_08054	OsI_38949	B8AFE9	A2ZM96	Uncharacterized protein.	Pribosyltran domain-containing protein.	0.927
OsI_08054	PURA	B8AFE9	A2XD35	Uncharacterized protein.	Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity). Belongs to the adenylosuccinate synthetase family.	0.619
OsI_08054	PURA-2	B8AFE9	B8AQ03	Uncharacterized protein.	Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	0.619
OsI_08056	OsI_08139	B8AFF1	A2X7E9	Pribosyltran domain-containing protein.	PfkB domain-containing protein.	0.916
OsI_08056	OsI_11289	B8AFF1	A2XFY9	Pribosyltran domain-containing protein.	Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.	0.951
OsI_08056	OsI_16544	B8AFF1	A2XVA4	Pribosyltran domain-containing protein.	Pribosyltran domain-containing protein.	0.824
OsI_08056	OsI_16657	B8AFF1	B8AS20	Pribosyltran domain-containing protein.	PfkB domain-containing protein.	0.916
OsI_08056	OsI_26014	B8AFF1	B8B626	Pribosyltran domain-containing protein.	Pribosyltran domain-containing protein.	0.835
OsI_08056	OsI_38931	B8AFF1	A2ZM75	Pribosyltran domain-containing protein.	Pribosyltran domain-containing protein.	0.953
OsI_08056	OsI_38949	B8AFF1	A2ZM96	Pribosyltran domain-containing protein.	Pribosyltran domain-containing protein.	0.929
OsI_08056	PURA	B8AFF1	A2XD35	Pribosyltran domain-containing protein.	Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity). Belongs to the adenylosuccinate synthetase family.	0.619
OsI_08056	PURA-2	B8AFF1	B8AQ03	Pribosyltran domain-containing protein.	Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	0.619
OsI_08139	OsI_08054	A2X7E9	B8AFE9	PfkB domain-containing protein.	Uncharacterized protein.	0.916
OsI_08139	OsI_08056	A2X7E9	B8AFF1	PfkB domain-containing protein.	Pribosyltran domain-containing protein.	0.916
OsI_08139	OsI_11289	A2X7E9	A2XFY9	PfkB domain-containing protein.	Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.	0.975
OsI_08139	OsI_16544	A2X7E9	A2XVA4	PfkB domain-containing protein.	Pribosyltran domain-containing protein.	0.974

page 1 of 6

Server load: low (12%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About