STRINGSTRING
OsI_36899 OsI_36899 OsI_36650 OsI_36650 OsI_36648 OsI_36648 OsI_34997 OsI_34997 OsI_34205 OsI_34205 OsI_04778 OsI_04778 OsI_03640 OsI_03640 OsI_03944 OsI_03944 OsI_00930 OsI_00930 OsI_01192 OsI_01192 OsI_01203 OsI_01203 OsI_02833 OsI_02833 OsI_00397 OsI_00397 OsI_00680 OsI_00680 OsI_06488 OsI_06488 OsI_07871 OsI_07871 OsI_06808 OsI_06808 OsI_07008 OsI_07008 OsI_05474 OsI_05474 OsI_05960 OsI_05960 OsI_10864 OsI_10864 OsI_12334 OsI_12334 OsI_09686 OsI_09686 OsI_11062 OsI_11062 OsI_09782 OsI_09782 OsI_11265 OsI_11265 OsI_12602 OsI_12602 OsI_09940 OsI_09940 OsI_09941 OsI_09941 OsI_14287 OsI_14287 OsI_14308 OsI_14308 OsI_14311 OsI_14311 OsI_12907 OsI_12907 OsI_14394 OsI_14394 OsI_10067 OsI_10067 OsI_13119 OsI_13119 OsI_13197 OsI_13197 OsI_11808 OsI_11808 OsI_13354 OsI_13354 OsI_11930 OsI_11930 OsI_16522 OsI_16522 OsI_17991 OsI_17991 OsI_18045 OsI_18045 OsI_17372 OsI_17372 OsI_19324 OsI_19324 OsI_19328 OsI_19328 OsI_19416 OsI_19416 OsI_18246 OsI_18246 OsI_19812 OsI_19812 OsI_18429 OsI_18429 OsI_20717 OsI_20717 OsI_24210 OsI_24210 OsI_21547 OsI_21547 OsI_21581 OsI_21581 OsI_23301 OsI_23301 OsI_27222 OsI_27222 OsI_27360 OsI_27360 OsI_26563 OsI_26563 OsI_25360 OsI_25360 OsI_27610 OsI_27610 OsI_27679 OsI_27679 OsI_27608 OsI_27608 OsI_27702 OsI_27702 OsI_28229 OsI_28229 OsI_28232 OsI_28232 OsI_33668 OsI_33668 OsI_34077 OsI_34077 OsI_34540 OsI_34540 OsI_34542 OsI_34542 OsI_37435 OsI_37435 OsI_38741 OsI_38741 OsI_37983 OsI_37983 OsI_38123 OsI_38123 ycf72-1 ycf72-1 infA infA rpl14 rpl14 rpl16 rpl16 rpl22 rpl22 rpl20 rpl20 rpl23-A rpl23-A rps12-A rps12-A rps11 rps11 rps14 rps14 rps18 rps18 rps19-A rps19-A rps3 rps3 rps4 rps4 rps7-A rps7-A rps8 rps8 rpl2-A rpl2-A OsI_09417 OsI_09417 OsI_33952 OsI_33952 OsI_32294 OsI_32294 OsI_31831 OsI_31831 OsI_30679 OsI_30679 OsI_30415 OsI_30415 OsI_30249 OsI_30249 OsI_28953 OsI_28953 OsI_27850 OsI_27850 OsI_26961 OsI_26961 OsI_25353 OsI_25353 RPL11 RPL11 OsI_23088 OsI_23088 OsI_21295 OsI_21295 OsI_21018 OsI_21018 OsI_20708 OsI_20708 OsI_20554 OsI_20554 OsI_19685 OsI_19685 OsI_19240 OsI_19240 OsI_18847 OsI_18847 OsI_17786 OsI_17786 OsI_17403 OsI_17403 OsI_17369 OsI_17369 OsI_17237 OsI_17237 OsI_16531 OsI_16531 OsI_16517 OsI_16517 OsI_07537 OsI_07537 OsI_14280 OsI_14280 OsI_14156 OsI_14156 OsI_14055 OsI_14055 OsI_13671 OsI_13671 OsI_13529 OsI_13529 OsI_12226 OsI_12226 OsI_12084 OsI_12084 OsI_11607 OsI_11607 OsI_11523 OsI_11523 OsI_10184 OsI_10184 OsI_09939 OsI_09939 OsI_09799 OsI_09799 OsI_09498 OsI_09498 OsI_09420 OsI_09420 OsI_08582 OsI_08582 OsI_08528 OsI_08528 OsI_08460 OsI_08460 OsI_07157 OsI_07157 OsI_06639 OsI_06639 OsI_06487 OsI_06487 OsI_05578 OsI_05578 OsI_05548 OsI_05548 OsI_05494 OsI_05494 RPL5A RPL5A OsI_04121 OsI_04121 OsI_03263 OsI_03263 OsI_02967 OsI_02967 OsI_02667 OsI_02667 OsI_02165 OsI_02165 OsI_01884 OsI_01884 OsI_01816 OsI_01816 OsI_01394 OsI_01394 OsI_00826 OsI_00826 OsI_39124 OsI_39124 OsI_38738 OsI_38738 OsI_38734 OsI_38734 OsI_38384 OsI_38384 OsI_38381 OsI_38381 OsI_38015 OsI_38015 OsI_37384 OsI_37384
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OsI_36899Uncharacterized protein. (279 aa)
OsI_3665040S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (195 aa)
OsI_36648S4 RNA-binding domain-containing protein. (76 aa)
OsI_3499760S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (320 aa)
OsI_34205Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family. (274 aa)
OsI_04778Ribosomal_L18_c domain-containing protein. (304 aa)
OsI_0364050S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (122 aa)
OsI_03944Uncharacterized protein. (204 aa)
OsI_00930Uncharacterized protein. (179 aa)
OsI_01192Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (319 aa)
OsI_01203S1-like domain-containing protein. (64 aa)
OsI_02833Uncharacterized protein. (133 aa)
OsI_00397Brix domain-containing protein. (564 aa)
OsI_00680Uncharacterized protein. (618 aa)
OsI_06488Uncharacterized protein. (72 aa)
OsI_07871Brix domain-containing protein. (331 aa)
OsI_06808Uncharacterized protein. (284 aa)
OsI_07008Uncharacterized protein. (278 aa)
OsI_05474Uncharacterized protein. (183 aa)
OsI_05960Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (150 aa)
OsI_10864Uncharacterized protein. (324 aa)
OsI_12334Ribosomal_L2_C domain-containing protein. (141 aa)
OsI_09686Uncharacterized protein. (483 aa)
OsI_11062Uncharacterized protein. (220 aa)
OsI_09782Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (325 aa)
OsI_11265Uncharacterized protein. (588 aa)
OsI_12602Ribosomal_TL5_C domain-containing protein. (239 aa)
OsI_09940Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (103 aa)
OsI_09941Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (64 aa)
OsI_14287Uncharacterized protein. (549 aa)
OsI_14308Uncharacterized protein. (96 aa)
OsI_14311Uncharacterized protein. (610 aa)
OsI_12907Uncharacterized protein. (226 aa)
OsI_14394Smr domain-containing protein. (701 aa)
OsI_10067S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family. (292 aa)
OsI_13119Uncharacterized protein. (114 aa)
OsI_13197Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (171 aa)
OsI_11808Ribosomal_S4 domain-containing protein. (148 aa)
OsI_13354Ribosomal_L6 domain-containing protein; Belongs to the universal ribosomal protein uL6 family. (103 aa)
OsI_11930Ribosomal_L2_C domain-containing protein. (154 aa)
OsI_16522Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (165 aa)
OsI_17991Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (291 aa)
OsI_18045Uncharacterized protein. (145 aa)
OsI_17372Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (161 aa)
OsI_19324Uncharacterized protein. (266 aa)
OsI_19328Uncharacterized protein. (565 aa)
OsI_19416Uncharacterized protein. (1233 aa)
OsI_18246Uncharacterized protein. (479 aa)
OsI_19812Uncharacterized protein. (414 aa)
OsI_18429Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (400 aa)
OsI_20717Uncharacterized protein. (206 aa)
OsI_24210KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family. (190 aa)
OsI_21547Brix domain-containing protein. (360 aa)
OsI_21581Uncharacterized protein. (544 aa)
OsI_23301Uncharacterized protein. (417 aa)
OsI_27222Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (103 aa)
OsI_27360Uncharacterized protein. (1361 aa)
OsI_26563Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
OsI_25360Epimerase domain-containing protein. (392 aa)
OsI_27610Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
OsI_27679Ribosomal protein L37; Binds to the 23S rRNA. (94 aa)
OsI_27608Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
OsI_27702RL10P_insert domain-containing protein. (216 aa)
OsI_28229Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (159 aa)
OsI_28232Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family. (437 aa)
OsI_33668RNase III domain-containing protein. (253 aa)
OsI_34077Uncharacterized protein. (323 aa)
OsI_34540Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (71 aa)
OsI_34542Ribosomal_L2_C domain-containing protein. (141 aa)
OsI_37435Uncharacterized protein. (556 aa)
OsI_38741Uncharacterized protein. (129 aa)
OsI_37983Uncharacterized protein. (776 aa)
OsI_38123Epimerase domain-containing protein. (373 aa)
ycf72-1Uncharacterized protein ycf72. (137 aa)
infATranslation initiation factor IF-1, chloroplastic; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. (107 aa)
rpl1450S ribosomal protein L14, chloroplastic; Binds to 23S rRNA. (123 aa)
rpl1650S ribosomal protein L16, chloroplastic; Belongs to the universal ribosomal protein uL16 family. (136 aa)
rpl2250S ribosomal protein L22, chloroplastic; This protein binds specifically to 23S rRNA; Belongs to the universal ribosomal protein uL22 family. (149 aa)
rpl2050S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity). (119 aa)
rpl23-A50S ribosomal protein L23, chloroplastic; Binds to 23S rRNA. (93 aa)
rps12-A30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (By similarity). (124 aa)
rps1130S ribosomal protein S11, chloroplastic; Belongs to the universal ribosomal protein uS11 family. (143 aa)
rps1430S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles. (103 aa)
rps1830S ribosomal protein S18, chloroplastic; Belongs to the bacterial ribosomal protein bS18 family. (163 aa)
rps19-A30S ribosomal protein S19, chloroplastic; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (93 aa)
rps330S ribosomal protein S3, chloroplastic; Belongs to the universal ribosomal protein uS3 family. (239 aa)
rps430S ribosomal protein S4, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. Belongs to the universal ribosomal protein uS4 family. (201 aa)
rps7-A30S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. (156 aa)
rps830S ribosomal protein S8, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit. (136 aa)
rpl2-A50S ribosomal protein L2, chloroplastic. (273 aa)
OsI_09417Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (140 aa)
OsI_33952Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (155 aa)
OsI_32294Uncharacterized protein. (122 aa)
OsI_3183160S ribosomal protein l9. (190 aa)
OsI_30679Uncharacterized protein. (226 aa)
OsI_30415KH type-2 domain-containing protein. (69 aa)
OsI_30249Uncharacterized protein. (285 aa)
OsI_28953Uncharacterized protein. (107 aa)
OsI_27850Brix domain-containing protein. (180 aa)
OsI_26961S4 RNA-binding domain-containing protein. (118 aa)
OsI_25353Uncharacterized protein. (1274 aa)
RPL1160S ribosomal protein L11; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...] (182 aa)
OsI_23088G domain-containing protein. (681 aa)
OsI_21295Uncharacterized protein. (279 aa)
OsI_21018Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family. (423 aa)
OsI_20708Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family. (151 aa)
OsI_20554Brix domain-containing protein. (273 aa)
OsI_1968540S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (279 aa)
OsI_19240Ribosomal_TL5_C domain-containing protein. (265 aa)
OsI_18847Uncharacterized protein. (117 aa)
OsI_17786S4 RNA-binding domain-containing protein. (157 aa)
OsI_17403Uncharacterized protein. (114 aa)
OsI_17369Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (170 aa)
OsI_17237Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (179 aa)
OsI_16531Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (167 aa)
OsI_16517Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (162 aa)
OsI_07537Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (151 aa)
OsI_14280Uncharacterized protein. (215 aa)
OsI_14156Uncharacterized protein. (170 aa)
OsI_14055Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family. (210 aa)
OsI_13671Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (223 aa)
OsI_13529Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family. (226 aa)
OsI_12226S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (316 aa)
OsI_12084Uncharacterized protein. (120 aa)
OsI_11607Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family. (226 aa)
OsI_11523Brix domain-containing protein. (360 aa)
OsI_10184Uncharacterized protein. (175 aa)
OsI_09939Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (104 aa)
OsI_09799Uncharacterized protein. (279 aa)
OsI_09498RIBOSOMAL_L9 domain-containing protein. (201 aa)
OsI_09420Ribosomal protein L37; Binds to the 23S rRNA. (95 aa)
OsI_08582Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (166 aa)
OsI_08528Uncharacterized protein. (181 aa)
OsI_08460Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (199 aa)
OsI_07157Uncharacterized protein. (313 aa)
OsI_06639Uncharacterized protein. (214 aa)
OsI_06487Uncharacterized protein. (107 aa)
OsI_05578Uncharacterized protein. (369 aa)
OsI_05548Ribosomal protein L37; Binds to the 23S rRNA. (94 aa)
OsI_0549440S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (265 aa)
RPL5A60S ribosomal protein L5-1; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome throug [...] (304 aa)
OsI_04121Uncharacterized protein. (167 aa)
OsI_03263Uncharacterized protein. (196 aa)
OsI_0296750S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. (135 aa)
OsI_02667Ribosomal_TL5_C domain-containing protein. (271 aa)
OsI_02165Brix domain-containing protein. (310 aa)
OsI_0188440S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (265 aa)
OsI_01816Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (152 aa)
OsI_01394Uncharacterized protein. (143 aa)
OsI_00826Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family. (182 aa)
OsI_39124Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (170 aa)
OsI_38738Uncharacterized protein. (317 aa)
OsI_38734Uncharacterized protein. (127 aa)
OsI_38384S4 RNA-binding domain-containing protein. (173 aa)
OsI_38381Ribosomal_S4 domain-containing protein; Belongs to the universal ribosomal protein uS4 family. (192 aa)
OsI_38015Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (170 aa)
OsI_3738460S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (320 aa)
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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