42 items (Oryza sativa Indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

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protein homology

Your Input:
	OsI_26062	Ubiquitin-like domain-containing protein. (86 aa)
	OsI_26040	Ubiquitin-like domain-containing protein. (139 aa)
	ATG12	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagy vesicles formation. Conjugation with ATG5 through a ubiquitin-like conjugating system is essential for its function. ATG12/ATG5 conjugate has an essential role in plant nutrient recycling (By similarity); Belongs to the ATG12 family. (93 aa)
	OsI_20535	Uncharacterized protein. (381 aa)
	OsI_17529	Uncharacterized protein. (381 aa)
	OsI_10821	Ubiquitin-like domain-containing protein. (136 aa)
	OsI_10655	Ubiquitin-like domain-containing protein. (171 aa)
	OsI_04943	Small ubiquitin-related modifier. (100 aa)
	OsI_04942	Small ubiquitin-related modifier. (101 aa)
	OsI_03027	Ubiquitin-like domain-containing protein. (134 aa)
	OsI_03026	Uncharacterized protein. (152 aa)
	OsI_03024	Uncharacterized protein. (154 aa)
	OsI_02791	Rad60-SLD domain-containing protein. (245 aa)
	OsI_01971	Ubiquitin-like domain-containing protein. (279 aa)
	OsI_01687	Ubiquitin-like domain-containing protein. (155 aa)
	OsI_34140	Ubiquitin-like domain-containing protein. (81 aa)
	OsI_34138	Uncharacterized protein. (281 aa)
	OsI_32449	Ubiquitin-like domain-containing protein. (129 aa)
	OsI_31820	Ubiquitin-like domain-containing protein. (140 aa)
	OsI_31818	Ubiquitin-like domain-containing protein. (139 aa)
	OsI_28070	Uncharacterized protein. (254 aa)
	OsI_28061	Ubiquitin-like domain-containing protein. (302 aa)
	OsI_24083	Uncharacterized protein. (240 aa)
	OsI_24193	Uncharacterized protein. (533 aa)
	OsI_24195	Uncharacterized protein. (223 aa)
	OsI_25925	Ubiquitin-related modifier 1 homolog; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress spec [...] (200 aa)
	OsI_23921	Uncharacterized protein. (153 aa)
	OsI_20205	Ubiquitin-like domain-containing protein. (83 aa)
	OsI_05955	Uncharacterized protein. (457 aa)
	OsI_08154	Ubiquitin family protein. (73 aa)
	OsI_37438	Ubiquitin-like domain-containing protein. (73 aa)
	OsI_35087	Ubiquitin-like domain-containing protein. (73 aa)
	OsI_34511	Ubiquitin-like domain-containing protein. (81 aa)
	OsI_34137	Uncharacterized protein. (162 aa)
	OsI_34017	Uncharacterized protein. (322 aa)
	OsI_31610	Ubiquitin-like domain-containing protein. (140 aa)
	OsI_31396	Uncharacterized protein. (153 aa)
	OsI_28067	Ubiquitin-like domain-containing protein. (253 aa)
	OsI_26581	Uncharacterized protein. (295 aa)
	OsI_26580	Uncharacterized protein. (327 aa)
	OsI_26579	Ubiquitin-like domain-containing protein. (110 aa)
	OsI_26576	Ubiquitin-like domain-containing protein. (110 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATG12	OsI_03024	A2YAG8	A2WT34	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagy vesicles formation. Conjugation with ATG5 through a ubiquitin-like conjugating system is essential for its function. ATG12/ATG5 conjugate has an essential role in plant nutrient recycling (By similarity); Belongs to the ATG12 family.	Uncharacterized protein.	0.438
OsI_01687	OsI_01971	A2WPB5	A2WQ37	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.686
OsI_01687	OsI_02791	A2WPB5	A2WSF3	Ubiquitin-like domain-containing protein.	Rad60-SLD domain-containing protein.	0.502
OsI_01687	OsI_03024	A2WPB5	A2WT34	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.950
OsI_01687	OsI_03026	A2WPB5	A2WT36	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.765
OsI_01687	OsI_03027	A2WPB5	A2WT37	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.756
OsI_01687	OsI_04942	A2WPB5	A2WYE0	Ubiquitin-like domain-containing protein.	Small ubiquitin-related modifier.	0.686
OsI_01687	OsI_04943	A2WPB5	A2WYE1	Ubiquitin-like domain-containing protein.	Small ubiquitin-related modifier.	0.686
OsI_01687	OsI_05955	A2WPB5	B8AI68	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.967
OsI_01687	OsI_10655	A2WPB5	A2XEA1	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.995
OsI_01687	OsI_10821	A2WPB5	A2XEQ8	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.978
OsI_01687	OsI_17529	A2WPB5	A2XXV3	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.949
OsI_01687	OsI_20535	A2WPB5	A2Y6A4	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.949
OsI_01687	OsI_23921	A2WPB5	B8B0S9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.950
OsI_01687	OsI_24083	A2WPB5	B8B180	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.968
OsI_01687	OsI_24193	A2WPB5	B8B1H0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.967
OsI_01687	OsI_24195	A2WPB5	B8B1H2	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.949
OsI_01687	OsI_26040	A2WPB5	A2YLE5	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.995
OsI_01687	OsI_26062	A2WPB5	A2YLG7	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.762
OsI_01687	OsI_26576	A2WPB5	A2YMW9	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.686

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