9 items (Oryza sativa Indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OsI_02297	Uncharacterized protein. (504 aa)
	OsI_33786	Uncharacterized protein. (755 aa)
	OsI_31880	Uncharacterized protein. (330 aa)
	OsI_29256	Uncharacterized protein. (837 aa)
	OsI_33783	CDC48_N domain-containing protein. (75 aa)
	OsI_17067	Uncharacterized protein. (320 aa)
	cdc48	AAA-ATPase. (809 aa)
	OsI_00362	Uncharacterized protein. (281 aa)
	OsI_06110	Uncharacterized protein. (315 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OsI_00362	OsI_06110	A2WKK6	A2X1N0	Uncharacterized protein.	Uncharacterized protein.	0.869
OsI_00362	OsI_17067	A2WKK6	A2XWN8	Uncharacterized protein.	Uncharacterized protein.	0.870
OsI_00362	OsI_29256	A2WKK6	B8BAT4	Uncharacterized protein.	Uncharacterized protein.	0.871
OsI_00362	OsI_33783	A2WKK6	A2Z7U7	Uncharacterized protein.	CDC48_N domain-containing protein.	0.871
OsI_00362	OsI_33786	A2WKK6	B8BH45	Uncharacterized protein.	Uncharacterized protein.	0.871
OsI_00362	cdc48	A2WKK6	A2XCL6	Uncharacterized protein.	AAA-ATPase.	0.871
OsI_02297	OsI_29256	A2WR13	B8BAT4	Uncharacterized protein.	Uncharacterized protein.	0.871
OsI_02297	OsI_33783	A2WR13	A2Z7U7	Uncharacterized protein.	CDC48_N domain-containing protein.	0.871
OsI_02297	OsI_33786	A2WR13	B8BH45	Uncharacterized protein.	Uncharacterized protein.	0.871
OsI_02297	cdc48	A2WR13	A2XCL6	Uncharacterized protein.	AAA-ATPase.	0.871
OsI_06110	OsI_00362	A2X1N0	A2WKK6	Uncharacterized protein.	Uncharacterized protein.	0.869
OsI_06110	OsI_17067	A2X1N0	A2XWN8	Uncharacterized protein.	Uncharacterized protein.	0.865
OsI_06110	OsI_29256	A2X1N0	B8BAT4	Uncharacterized protein.	Uncharacterized protein.	0.871
OsI_06110	OsI_33783	A2X1N0	A2Z7U7	Uncharacterized protein.	CDC48_N domain-containing protein.	0.871
OsI_06110	OsI_33786	A2X1N0	B8BH45	Uncharacterized protein.	Uncharacterized protein.	0.871
OsI_06110	cdc48	A2X1N0	A2XCL6	Uncharacterized protein.	AAA-ATPase.	0.871
OsI_17067	OsI_00362	A2XWN8	A2WKK6	Uncharacterized protein.	Uncharacterized protein.	0.870
OsI_17067	OsI_06110	A2XWN8	A2X1N0	Uncharacterized protein.	Uncharacterized protein.	0.865
OsI_17067	OsI_29256	A2XWN8	B8BAT4	Uncharacterized protein.	Uncharacterized protein.	0.871
OsI_17067	OsI_33783	A2XWN8	A2Z7U7	Uncharacterized protein.	CDC48_N domain-containing protein.	0.871

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