26 items (Oryza sativa Indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OsI_26023	AA_TRNA_LIGASE_II domain-containing protein. (377 aa)
	OsI_08483	Uncharacterized protein. (250 aa)
	OsI_07633	Uncharacterized protein. (1906 aa)
	OsI_12663	Uncharacterized protein. (212 aa)
	OsI_12664	Uncharacterized protein. (275 aa)
	OsI_10081	DsbD_2 domain-containing protein. (356 aa)
	OsI_10474	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (602 aa)
	OsI_19594	APC1_C domain-containing protein. (1799 aa)
	OsI_21491	WD_REPEATS_REGION domain-containing protein. (392 aa)
	OsI_23051	Uncharacterized protein. (180 aa)
	OsI_23052	AA_TRNA_LIGASE_II domain-containing protein. (202 aa)
	OsI_08130	Lysine--tRNA ligase. (603 aa)
	OsI_25016	AA_TRNA_LIGASE_II domain-containing protein. (448 aa)
	OsI_35467	Uncharacterized protein. (1041 aa)
	OsI_35468	Uncharacterized protein. (181 aa)
	OsI_35469	Uncharacterized protein. (695 aa)
	OsI_37794	K-box domain-containing protein. (241 aa)
	OsI_13664	SANT domain-containing protein. (391 aa)
	OsI_09155	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1058 aa)
	OsI_05771	CPSF_A domain-containing protein. (1234 aa)
	OsI_21389	Uncharacterized protein. (367 aa)
	OsI_23053	AA_TRNA_LIGASE_II domain-containing protein. (409 aa)
	OsI_26553	Uncharacterized protein. (129 aa)
	OsI_38947	Uncharacterized protein. (363 aa)
	OsI_02108	G domain-containing protein. (370 aa)
	OsI_09206	Uncharacterized protein. (706 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OsI_02108	OsI_21491	B8A8Y3	B8B2C2	G domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.443
OsI_07633	OsI_09206	B8AJE9	B8AE12	Uncharacterized protein.	Uncharacterized protein.	0.503
OsI_07633	OsI_19594	B8AJE9	B8AX27	Uncharacterized protein.	APC1_C domain-containing protein.	0.628
OsI_08130	OsI_09155	B8AFP7	B8AJH5	Lysine--tRNA ligase.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.934
OsI_08130	OsI_10474	B8AFP7	B8AQH8	Lysine--tRNA ligase.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.872
OsI_08130	OsI_23051	B8AFP7	B8B2S5	Lysine--tRNA ligase.	Uncharacterized protein.	0.683
OsI_08130	OsI_23052	B8AFP7	B8B2S6	Lysine--tRNA ligase.	AA_TRNA_LIGASE_II domain-containing protein.	0.683
OsI_08130	OsI_23053	B8AFP7	A2YD58	Lysine--tRNA ligase.	AA_TRNA_LIGASE_II domain-containing protein.	0.683
OsI_08130	OsI_25016	B8AFP7	B8B7K8	Lysine--tRNA ligase.	AA_TRNA_LIGASE_II domain-containing protein.	0.934
OsI_08130	OsI_26023	B8AFP7	B8B663	Lysine--tRNA ligase.	AA_TRNA_LIGASE_II domain-containing protein.	0.754
OsI_08483	OsI_37794	B8AGQ2	B8BNL6	Uncharacterized protein.	K-box domain-containing protein.	0.455
OsI_09155	OsI_08130	B8AJH5	B8AFP7	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Lysine--tRNA ligase.	0.934
OsI_09155	OsI_10474	B8AJH5	B8AQH8	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.921
OsI_09155	OsI_23051	B8AJH5	B8B2S5	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein.	0.540
OsI_09155	OsI_23052	B8AJH5	B8B2S6	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	AA_TRNA_LIGASE_II domain-containing protein.	0.540
OsI_09155	OsI_23053	B8AJH5	A2YD58	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	AA_TRNA_LIGASE_II domain-containing protein.	0.540
OsI_09155	OsI_25016	B8AJH5	B8B7K8	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	AA_TRNA_LIGASE_II domain-containing protein.	0.986
OsI_09155	OsI_26023	B8AJH5	B8B663	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	AA_TRNA_LIGASE_II domain-containing protein.	0.844
OsI_09206	OsI_07633	B8AE12	B8AJE9	Uncharacterized protein.	Uncharacterized protein.	0.503
OsI_09206	OsI_19594	B8AE12	B8AX27	Uncharacterized protein.	APC1_C domain-containing protein.	0.999

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