STRINGSTRING
OsI_08136 OsI_08136 OsI_03763 OsI_03763 OsI_10206 OsI_10206 Ehd2 Ehd2 OsI_27882 OsI_27882 OsI_20624 OsI_20624 OsI_11548 OsI_11548
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OsI_08136Photolyase/cryptochrome alpha/beta domain-containing protein. (665 aa)
OsI_03763Uncharacterized protein. (542 aa)
OsI_10206Peptidase S59 domain-containing protein. (1005 aa)
Ehd2Protein EARLY HEADING DATE 2; Transcription activator that acts as a flowering master switch in both long and short days, independently of the circadian clock (By similarity). Promotes flowering upstream of HD1 by up- regulating FTL1, FTL4, FTL5, FTL6, EHD1, HD3A and RFT1 (By similarity). Seems to repress FTL11 expression (By similarity). May recognize the consensus motif 5'-TTTGTCGTAAT-3' in target gene promoters (By similarity). (476 aa)
OsI_27882HTH myb-type domain-containing protein. (719 aa)
OsI_20624Uncharacterized protein. (669 aa)
OsI_11548MIF4G domain-containing protein. (855 aa)
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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